RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 MACC1Q6ZN28 852 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 FAM183BPQ6ZVS7 135 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 PCDH20Q8N6Y1 951 aaKnown RBP16.95■□□□□ 0.3
CHMP3-203ENST00000409225 EHBP1Q8NDI1 1231 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 SCG3Q8WXD2 468 aaKnown RBP16.95■□□□□ 0.3
CHMP3-203ENST00000409225 ASB12Q8WXK4 309 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 CENPTQ96BT3 561 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 CPXM1Q96SM3 734 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 GTPBP4Q9BZE4 634 aaKnown RBP16.95■□□□□ 0.3
CHMP3-203ENST00000409225 CEP44Q9C0F1 390 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 TKTL2Q9H0I9 626 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 LRRN3Q9H3W5 708 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 ANLNQ9NQW6 1124 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 CNTN6Q9UQ52 1028 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 PCDHB11Q9Y5F2 797 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 SCN8AQ9UQD0 1980 aa16.95■□□□□ 0.3
CHMP3-203ENST00000409225 DAB1O75553 588 aa16.94■□□□□ 0.3
CHMP3-203ENST00000409225 OR1E1P30953 314 aa16.94■□□□□ 0.3
CHMP3-203ENST00000409225 EIF4A3P38919 411 aaKnown RBP16.94■□□□□ 0.3
CHMP3-203ENST00000409225 ETV5P41161 510 aa16.94■□□□□ 0.3
CHMP3-203ENST00000409225 MAPK10P53779 464 aa16.94■□□□□ 0.3
CHMP3-203ENST00000409225 YPEL5P62699 121 aa16.94■□□□□ 0.3
CHMP3-203ENST00000409225 LRRC63Q05C16 580 aa16.94■□□□□ 0.3
CHMP3-203ENST00000409225 ZNF658Q5TYW1 1059 aaPredicted RBP16.94■□□□□ 0.3
CHMP3-203ENST00000409225 OTUD1Q5VV17 481 aaPredicted RBP16.94■□□□□ 0.3
CHMP3-203ENST00000409225 RETSATQ6NUM9 610 aa16.94■□□□□ 0.3
CHMP3-203ENST00000409225 LRRC31Q6UY01 552 aa16.94■□□□□ 0.3
CHMP3-203ENST00000409225 ZNF683Q8IZ20 524 aa16.94■□□□□ 0.3
CHMP3-203ENST00000409225 FSTL5Q8N475 847 aaPredicted RBP16.94■□□□□ 0.3
CHMP3-203ENST00000409225 RYBPQ8N488 228 aaPredicted RBP16.94■□□□□ 0.3
CHMP3-203ENST00000409225 Q8N9G6 341 aaPredicted RBP16.94■□□□□ 0.3
CHMP3-203ENST00000409225 OR6K2Q8NGY2 324 aa16.94■□□□□ 0.3
CHMP3-203ENST00000409225 USP7Q93009 1102 aa16.94■□□□□ 0.3
CHMP3-203ENST00000409225 TM6SF2Q9BZW4 377 aa16.94■□□□□ 0.3
CHMP3-203ENST00000409225 EPN3Q9H201 632 aa16.94■□□□□ 0.3
CHMP3-203ENST00000409225 PIGVQ9NUD9 493 aa16.94■□□□□ 0.3
CHMP3-203ENST00000409225 RMND1Q9NWS8 449 aa16.94■□□□□ 0.3
CHMP3-203ENST00000409225 GPR34Q9UPC5 381 aa16.94■□□□□ 0.3
CHMP3-203ENST00000409225 ACTL7AQ9Y615 435 aa16.94■□□□□ 0.3
CHMP3-203ENST00000409225 TEX15Q9BXT5 2789 aa16.94■□□□□ 0.3
CHMP3-203ENST00000409225 LRRK2Q5S007 2527 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 DRGXA6NNA5 263 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 I6L893 689 aaPredicted RBP16.93■□□□□ 0.3
CHMP3-203ENST00000409225 P4HA2O15460 535 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 ZMPSTE24O75844 475 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 CTSEP14091 401 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 CR2P20023 1033 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 MORC3Q14149 939 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 ELOCQ15369 112 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 IGFBP7Q16270 282 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 COBLL1Q53SF7 1204 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 LRRC73Q5JTD7 316 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 HID1Q8IV36 788 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 PASD1Q8IV76 773 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 WDTC1Q8N5D0 677 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 ZNF564Q8TBZ8 553 aaPredicted RBP16.93■□□□□ 0.3
CHMP3-203ENST00000409225 TSACCQ96A04 125 aaPredicted RBP16.93■□□□□ 0.3
CHMP3-203ENST00000409225 RAB7BQ96AH8 199 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 INTS2Q9H0H0 1204 aaKnown RBP16.93■□□□□ 0.3
CHMP3-203ENST00000409225 WDCPQ9H6R7 721 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 ATP13A1Q9HD20 1204 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 MBNL1Q9NR56 388 aaKnown RBP16.93■□□□□ 0.3
CHMP3-203ENST00000409225 TMPRSS4Q9NRS4 437 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 ARHGEF38Q9NXL2 777 aa16.93■□□□□ 0.3
CHMP3-203ENST00000409225 ILVBLA1L0T0 632 aa16.92■□□□□ 0.3
CHMP3-203ENST00000409225 MMP20O60882 483 aa16.92■□□□□ 0.3
CHMP3-203ENST00000409225 ALPIP09923 528 aa16.92■□□□□ 0.3
CHMP3-203ENST00000409225 TFE3P19532 575 aaPredicted RBP16.92■□□□□ 0.3
CHMP3-203ENST00000409225 KRT85P78386 507 aa16.92■□□□□ 0.3
CHMP3-203ENST00000409225 ARF5P84085 180 aa16.92■□□□□ 0.3
CHMP3-203ENST00000409225 SLC20A2Q08357 652 aa16.92■□□□□ 0.3
CHMP3-203ENST00000409225 ZNF805Q5CZA5 627 aa16.92■□□□□ 0.3
CHMP3-203ENST00000409225 LVRNQ6Q4G3 990 aa16.92■□□□□ 0.3
CHMP3-203ENST00000409225 OLFML1Q6UWY5 402 aa16.92■□□□□ 0.3
CHMP3-203ENST00000409225 C11orf57Q6ZUT1 292 aaPredicted RBP16.92■□□□□ 0.3
CHMP3-203ENST00000409225 RD3Q7Z3Z2 195 aa16.92■□□□□ 0.3
CHMP3-203ENST00000409225 DTX1Q86Y01 620 aa16.92■□□□□ 0.3
CHMP3-203ENST00000409225 CCNJLQ8IV13 435 aa16.92■□□□□ 0.3
CHMP3-203ENST00000409225 JPH3Q8WXH2 748 aaPredicted RBP16.92■□□□□ 0.3
CHMP3-203ENST00000409225 EDEM3Q9BZQ6 932 aa16.92■□□□□ 0.3
CHMP3-203ENST00000409225 UBE2TQ9NPD8 197 aaPredicted RBP16.92■□□□□ 0.3
CHMP3-203ENST00000409225 A0A1W2PQ27 194 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 A0A1W2PQ64 194 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 A0A1W2PQC6 194 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 C9orf172C9J069 976 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 SRGAP2O75044 1071 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 ERBB2P04626 1255 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 UGT2B4P06133 528 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 CXCR3P49682 368 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 SULT1E1P49888 294 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 BLKP51451 505 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 HK3P52790 923 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 BRMS1LQ5PSV4 323 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 GKN2Q86XP6 184 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 CCDC34Q96HJ3 373 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 CEP63Q96MT8 703 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 EPAS1Q99814 870 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 C1QTNF7Q9BXJ2 289 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 ADNPQ9H2P0 1102 aa16.91■□□□□ 0.3
CHMP3-203ENST00000409225 ZFC3H1O60293 1989 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms