RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 SHOX2O60902 331 aaPredicted RBP9.92□□□□□ -0.82
POLR1A-202ENST00000409024 BANF1O75531 89 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 KRT37O76014 449 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 KRT38O76015 456 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 PAPSS2O95340 614 aaPredicted RBP9.92□□□□□ -0.82
POLR1A-202ENST00000409024 C1QAP02745 245 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 FGF1P05230 155 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 HOXB8P17481 243 aaPredicted RBP9.92□□□□□ -0.82
POLR1A-202ENST00000409024 PAMP19021 973 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 CR2P20023 1033 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 GBP2P32456 591 aaPredicted RBP9.92□□□□□ -0.82
POLR1A-202ENST00000409024 SLCO1A2P46721 670 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 VASPP50552 380 aaPredicted RBP9.92□□□□□ -0.82
POLR1A-202ENST00000409024 SGSHP51688 502 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 SESN2P58004 480 aaPredicted RBP9.92□□□□□ -0.82
POLR1A-202ENST00000409024 SULT2A1Q06520 285 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 ITKQ08881 620 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 MGAT5Q09328 741 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 CRYMQ14894 314 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 HP1BP3Q5SSJ5 553 aaPredicted RBP9.92□□□□□ -0.82
POLR1A-202ENST00000409024 SYCP2LQ5T4T6 812 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 UBAP2Q5T6F2 1119 aaKnown RBP9.92□□□□□ -0.82
POLR1A-202ENST00000409024 IER5LQ5T953 404 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 DENND5AQ6IQ26 1287 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 PKN3Q6P5Z2 889 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 TIFABQ6ZNK6 161 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 MARK2Q7KZI7 788 aaKnown RBP9.92□□□□□ -0.82
POLR1A-202ENST00000409024 SPRED2Q7Z698 418 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 GRASPQ7Z6J2 395 aaPredicted RBP9.92□□□□□ -0.82
POLR1A-202ENST00000409024 TRABD2AQ86V40 505 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 EXOC3L1Q86VI1 746 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 BBS7Q8IWZ6 715 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 LMNTD2Q8IXW0 634 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 MPP5Q8N3R9 675 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.92□□□□□ -0.82
POLR1A-202ENST00000409024 PPHLN1Q8NEY8 458 aaKnown RBP9.92□□□□□ -0.82
POLR1A-202ENST00000409024 SPATA22Q8NHS9 363 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 DCAKDQ8WVC6 231 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 TCEAL4Q96EI5 215 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 ALG14Q96F25 216 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 CFAP36Q96G28 342 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 NUDCD1Q96RS6 583 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 SRPK1Q96SB4 655 aaKnown RBP9.92□□□□□ -0.82
POLR1A-202ENST00000409024 C19orf43Q9BQ61 176 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 TRPV4Q9HBA0 871 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 SYBUQ9NX95 663 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 GDE1Q9NZC3 331 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 SMG5Q9UPR3 1016 aaKnown RBP9.92□□□□□ -0.82
POLR1A-202ENST00000409024 TECTAO75443 2155 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 NUP205Q92621 2012 aa9.92□□□□□ -0.82
POLR1A-202ENST00000409024 HEATR9A2RTY3 570 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 SMIM23A6NLE4 172 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 PER2O15055 1255 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 INSIG1O15503 277 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 PRPF4O43172 522 aaKnown RBP eCLIP9.91□□□□□ -0.82
POLR1A-202ENST00000409024 MT-CYBP00156 380 aaPredicted RBP9.91□□□□□ -0.82
POLR1A-202ENST00000409024 MMP2P08253 660 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 SNRPAP09012 282 aaKnown RBP9.91□□□□□ -0.82
POLR1A-202ENST00000409024 GJA1P17302 382 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 MDH1P40925 334 aaKnown RBP9.91□□□□□ -0.82
POLR1A-202ENST00000409024 HADHAP40939 763 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 CD86P42081 329 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 NRIP1P48552 1158 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 POLD2P49005 469 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 SERPINH1P50454 418 aaKnown RBP9.91□□□□□ -0.82
POLR1A-202ENST00000409024 AP1S1P61966 158 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 CDK18Q07002 472 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 NIPAL4Q0D2K0 466 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 TCF15Q12870 199 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 SPARCL1Q14515 664 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 CYTH1Q15438 398 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 TERF2Q15554 542 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 SLC1A5Q15758 541 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 SLC5A9Q2M3M2 681 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 KBTBD12Q3ZCT8 623 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 ANKRD20A4Q4UJ75 823 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 GRTP1Q5TC63 336 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 PDPK2PQ6A1A2 396 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 ADGRD2Q7Z7M1 963 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 GPR149Q86SP6 731 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 ARID3BQ8IVW6 561 aaPredicted RBP9.91□□□□□ -0.82
POLR1A-202ENST00000409024 ADHFE1Q8IWW8 467 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 PLPP6Q8IY26 295 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 PGBD5Q8N414 524 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 SH2D3CQ8N5H7 860 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 EFHBQ8N7U6 833 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.91□□□□□ -0.82
POLR1A-202ENST00000409024 IPMKQ8NFU5 416 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 OR52K2Q8NGK3 314 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 SCG3Q8WXD2 468 aaKnown RBP9.91□□□□□ -0.82
POLR1A-202ENST00000409024 IRF7Q92985 503 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 PBXIP1Q96AQ6 731 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 ISG20Q96AZ6 181 aaKnown RBP9.91□□□□□ -0.82
POLR1A-202ENST00000409024 IFT43Q96FT9 208 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 CERS2Q96G23 380 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 ZNF419Q96HQ0 510 aaPredicted RBP9.91□□□□□ -0.82
POLR1A-202ENST00000409024 LMLNQ96KR4 655 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 SMC6Q96SB8 1091 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 SEMA3CQ99985 751 aa9.91□□□□□ -0.82
POLR1A-202ENST00000409024 FICDQ9BVA6 458 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms