RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 ANTXRLA6NF34 631 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 PSMD3O43242 534 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 BNIP3LO60238 219 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 GSRP00390 522 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 AP1S1P61966 158 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 SNRPD1P62314 119 aaKnown RBP20.71■□□□□ 0.91
CHKB-201ENST00000406938 SLC14A2Q15849 920 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 HIF1AQ16665 826 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 RALGPS1Q5JS13 557 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 NAPEPLDQ6IQ20 393 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 NCEH1Q6PIU2 408 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 SRLQ86TD4 932 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 CCDC25Q86WR0 208 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 ZNF366Q8N895 744 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 KDM1BQ8NB78 822 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 TBL1YQ9BQ87 522 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 APOL2Q9BQE5 337 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 FICDQ9BVA6 458 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 EVLQ9UI08 416 aaPredicted RBP20.71■□□□□ 0.91
CHKB-201ENST00000406938 HCN2Q9UL51 889 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 SLC8A2Q9UPR5 921 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 ERLIN1O75477 346 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 GLULP15104 373 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 ADRA1AP35348 466 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 CSNK1DP48730 415 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 ARL4CP56559 192 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 SARNPP82979 210 aaKnown RBP20.71■□□□□ 0.91
CHKB-201ENST00000406938 MAP9Q49MG5 647 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 FNBP1LQ5T0N5 605 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 EGFLAMQ63HQ2 1017 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 FBXO38Q6PIJ6 1188 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 KDELC2Q7Z4H8 507 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 CAND1Q86VP6 1230 aaKnown RBP20.71■□□□□ 0.91
CHKB-201ENST00000406938 RYBPQ8N488 228 aaPredicted RBP20.71■□□□□ 0.91
CHKB-201ENST00000406938 MSANTD3Q96H12 275 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 FRMD8Q9BZ67 464 aaPredicted RBP20.71■□□□□ 0.91
CHKB-201ENST00000406938 FOXP3Q9BZS1 431 aa20.71■□□□□ 0.91
CHKB-201ENST00000406938 PIH1D1Q9NWS0 290 aaKnown RBP20.71■□□□□ 0.91
CHKB-201ENST00000406938 K7EQS6 105 aa20.7■□□□□ 0.9
CHKB-201ENST00000406938 AVILO75366 819 aa20.7■□□□□ 0.9
CHKB-201ENST00000406938 AGTP01019 485 aa20.7■□□□□ 0.9
CHKB-201ENST00000406938 H2AFXP16104 143 aaPredicted RBP20.7■□□□□ 0.9
CHKB-201ENST00000406938 TNFRSF4P43489 277 aa20.7■□□□□ 0.9
CHKB-201ENST00000406938 MAPK8P45983 427 aa20.7■□□□□ 0.9
CHKB-201ENST00000406938 CCNHP51946 323 aaPredicted RBP20.7■□□□□ 0.9
CHKB-201ENST00000406938 SLC44A4Q53GD3 710 aa20.7■□□□□ 0.9
CHKB-201ENST00000406938 CARD16Q5EG05 197 aa20.7■□□□□ 0.9
CHKB-201ENST00000406938 TMEM196Q5HYL7 178 aa20.7■□□□□ 0.9
CHKB-201ENST00000406938 EMBQ6PCB8 327 aa20.7■□□□□ 0.9
CHKB-201ENST00000406938 SERPINA13PQ6UXR4 307 aa20.7■□□□□ 0.9
CHKB-201ENST00000406938 DPY19L3Q6ZPD9 716 aa20.7■□□□□ 0.9
CHKB-201ENST00000406938 LINC00523Q86TU6 105 aa20.7■□□□□ 0.9
CHKB-201ENST00000406938 OR52K1Q8NGK4 314 aa20.7■□□□□ 0.9
CHKB-201ENST00000406938 OR2A12Q8NGT7 310 aa20.7■□□□□ 0.9
CHKB-201ENST00000406938 TDRD1Q9BXT4 1180 aaKnown RBP20.7■□□□□ 0.9
CHKB-201ENST00000406938 MTG2Q9H4K7 406 aa20.7■□□□□ 0.9
CHKB-201ENST00000406938 XAB2Q9HCS7 855 aaKnown RBP20.7■□□□□ 0.9
CHKB-201ENST00000406938 ZDHHC4Q9NPG8 344 aa20.7■□□□□ 0.9
CHKB-201ENST00000406938 ARGLU1Q9NWB6 273 aaPredicted RBP20.7■□□□□ 0.9
CHKB-201ENST00000406938 THAP10Q9P2Z0 257 aaPredicted RBP20.7■□□□□ 0.9
CHKB-201ENST00000406938 SORCS3Q9UPU3 1222 aa20.7■□□□□ 0.9
CHKB-201ENST00000406938 STARD13Q9Y3M8 1113 aa20.7■□□□□ 0.9
CHKB-201ENST00000406938 C19orf67A6NJJ6 358 aa20.69■□□□□ 0.9
CHKB-201ENST00000406938 PPFIA2O75334 1257 aa20.69■□□□□ 0.9
CHKB-201ENST00000406938 GKP32189 559 aa20.69■□□□□ 0.9
CHKB-201ENST00000406938 MAGEA3P43357 314 aa20.69■□□□□ 0.9
CHKB-201ENST00000406938 SEC13P55735 322 aa20.69■□□□□ 0.9
CHKB-201ENST00000406938 MSS51Q4VC12 460 aa20.69■□□□□ 0.9
CHKB-201ENST00000406938 EMC10Q5UCC4 262 aa20.69■□□□□ 0.9
CHKB-201ENST00000406938 FSTL4Q6MZW2 842 aa20.69■□□□□ 0.9
CHKB-201ENST00000406938 LRRC8BQ6P9F7 803 aa20.69■□□□□ 0.9
CHKB-201ENST00000406938 TPRG1Q6ZUI0 275 aa20.69■□□□□ 0.9
CHKB-201ENST00000406938 PDIK1LQ8N165 341 aa20.69■□□□□ 0.9
CHKB-201ENST00000406938 TMEM245Q9H330 911 aa20.69■□□□□ 0.9
CHKB-201ENST00000406938 CASS4Q9NQ75 786 aa20.69■□□□□ 0.9
CHKB-201ENST00000406938 PCDHGC4Q9Y5F7 938 aa20.69■□□□□ 0.9
CHKB-201ENST00000406938 MYO10Q9HD67 2058 aa20.69■□□□□ 0.9
CHKB-201ENST00000406938 SHISA7A6NL88 538 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 BANF1O75531 89 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 EGFP01133 1207 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 MLNP12872 115 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 HLA-EP13747 358 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 IL12RB1P42701 662 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 KIR2DL1P43626 348 aaPredicted RBP20.68■□□□□ 0.9
CHKB-201ENST00000406938 RECQLP46063 649 aaPredicted RBP20.68■□□□□ 0.9
CHKB-201ENST00000406938 GRSF1Q12849 480 aaKnown RBP eCLIP20.68■□□□□ 0.9
CHKB-201ENST00000406938 TRAF2Q12933 501 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 MYLK3Q32MK0 819 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 HNRNPA1L2Q32P51 320 aaKnown RBP20.68■□□□□ 0.9
CHKB-201ENST00000406938 CENPUQ71F23 418 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 TMC3Q7Z5M5 1100 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 PLPP6Q8IY26 295 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 ZNF513Q8N8E2 541 aaPredicted RBP20.68■□□□□ 0.9
CHKB-201ENST00000406938 DNAAF3Q8N9W5 541 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 ATXN2LQ8WWM7 1075 aaKnown RBP20.68■□□□□ 0.9
CHKB-201ENST00000406938 IFT43Q96FT9 208 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 FEM1CQ96JP0 617 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 ACOX2Q99424 681 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 PHACTR1Q9C0D0 580 aa20.68■□□□□ 0.9
CHKB-201ENST00000406938 TSPYL1Q9H0U9 437 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms