RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 CHST14Q8NCH0 376 aa16.77■□□□□ 0.28
CGREF1-205ENST00000404694 ORAI3Q9BRQ5 295 aa16.77■□□□□ 0.28
CGREF1-205ENST00000404694 NOL6Q9H6R4 1146 aaKnown RBP16.77■□□□□ 0.28
CGREF1-205ENST00000404694 CATSPERBQ9H7T0 1116 aa16.77■□□□□ 0.28
CGREF1-205ENST00000404694 TM9SF3Q9HD45 589 aa16.77■□□□□ 0.28
CGREF1-205ENST00000404694 PCSK1NQ9UHG2 260 aa16.77■□□□□ 0.28
CGREF1-205ENST00000404694 EFR3BQ9Y2G0 817 aa16.77■□□□□ 0.28
CGREF1-205ENST00000404694 FCF1Q9Y324 198 aaKnown RBP16.77■□□□□ 0.28
CGREF1-205ENST00000404694 NCOR2Q9Y618 2525 aa16.77■□□□□ 0.28
CGREF1-205ENST00000404694 ZNF487B1APH4 448 aa16.77■□□□□ 0.27
CGREF1-205ENST00000404694 FGF10O15520 208 aaPredicted RBP16.77■□□□□ 0.27
CGREF1-205ENST00000404694 SLC7A4O43246 635 aa16.77■□□□□ 0.27
CGREF1-205ENST00000404694 KCNA4P22459 653 aa16.77■□□□□ 0.27
CGREF1-205ENST00000404694 RECQLP46063 649 aaPredicted RBP16.77■□□□□ 0.27
CGREF1-205ENST00000404694 MARCKSL1P49006 195 aa16.77■□□□□ 0.27
CGREF1-205ENST00000404694 AFF3P51826 1226 aaKnown RBP16.77■□□□□ 0.27
CGREF1-205ENST00000404694 CNTN1Q12860 1018 aa16.77■□□□□ 0.27
CGREF1-205ENST00000404694 PDK2Q15119 407 aa16.77■□□□□ 0.27
CGREF1-205ENST00000404694 ERMARDQ5T6L9 678 aa16.77■□□□□ 0.27
CGREF1-205ENST00000404694 DPY19L3Q6ZPD9 716 aa16.77■□□□□ 0.27
CGREF1-205ENST00000404694 CPNE8Q86YQ8 564 aa16.77■□□□□ 0.27
CGREF1-205ENST00000404694 MAP7D3Q8IWC1 876 aa16.77■□□□□ 0.27
CGREF1-205ENST00000404694 PCDH20Q8N6Y1 951 aaKnown RBP16.77■□□□□ 0.27
CGREF1-205ENST00000404694 GRIN3AQ8TCU5 1115 aa16.77■□□□□ 0.27
CGREF1-205ENST00000404694 CAPZA3Q96KX2 299 aa16.77■□□□□ 0.27
CGREF1-205ENST00000404694 ZDHHC5Q9C0B5 715 aa16.77■□□□□ 0.27
CGREF1-205ENST00000404694 DHX35Q9H5Z1 703 aaKnown RBP16.77■□□□□ 0.27
CGREF1-205ENST00000404694 HPCAL4Q9UM19 191 aa16.77■□□□□ 0.27
CGREF1-205ENST00000404694 TP53BP1Q12888 1972 aaPredicted RBP16.76■□□□□ 0.27
CGREF1-205ENST00000404694 RNF103O00237 685 aa16.76■□□□□ 0.27
CGREF1-205ENST00000404694 KPNA3O00505 521 aaPredicted RBP16.76■□□□□ 0.27
CGREF1-205ENST00000404694 PLRG1O43660 514 aaKnown RBP16.76■□□□□ 0.27
CGREF1-205ENST00000404694 KCNK5O95279 499 aa16.76■□□□□ 0.27
CGREF1-205ENST00000404694 PRNPP04156 253 aa16.76■□□□□ 0.27
CGREF1-205ENST00000404694 PYGMP11217 842 aa16.76■□□□□ 0.27
CGREF1-205ENST00000404694 ZNF135P52742 658 aaPredicted RBP16.76■□□□□ 0.27
CGREF1-205ENST00000404694 GEMIN4P57678 1058 aaKnown RBP16.76■□□□□ 0.27
CGREF1-205ENST00000404694 BNC1Q01954 994 aa16.76■□□□□ 0.27
CGREF1-205ENST00000404694 TMIEQ8NEW7 156 aa16.76■□□□□ 0.27
CGREF1-205ENST00000404694 UBXN4Q92575 508 aa16.76■□□□□ 0.27
CGREF1-205ENST00000404694 ISG20Q96AZ6 181 aaKnown RBP16.76■□□□□ 0.27
CGREF1-205ENST00000404694 KCTD15Q96SI1 283 aaPredicted RBP16.76■□□□□ 0.27
CGREF1-205ENST00000404694 KDM4CQ9H3R0 1056 aa16.76■□□□□ 0.27
CGREF1-205ENST00000404694 EBF2Q9HAK2 575 aa16.76■□□□□ 0.27
CGREF1-205ENST00000404694 DNAAF2Q9NVR5 837 aaKnown RBP16.76■□□□□ 0.27
CGREF1-205ENST00000404694 IL36AQ9UHA7 158 aa16.76■□□□□ 0.27
CGREF1-205ENST00000404694 WASF2Q9Y6W5 498 aa16.76■□□□□ 0.27
CGREF1-205ENST00000404694 TMEM131Q92545 1883 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 A0A1W2PPC4 97 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 CCDC188H7C350 402 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 EEF2KO00418 725 aaKnown RBP16.75■□□□□ 0.27
CGREF1-205ENST00000404694 KDELR3O43731 214 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 OPHN1O60890 802 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 GJB3O75712 270 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 KRT1P04264 644 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 RARAP10276 462 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 IL1R2P27930 398 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 GRIA4P48058 902 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 CSNK1EP49674 416 aaKnown RBP16.75■□□□□ 0.27
CGREF1-205ENST00000404694 CCR5P51681 352 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 CCNHP51946 323 aaPredicted RBP16.75■□□□□ 0.27
CGREF1-205ENST00000404694 YBEYP58557 167 aaPredicted RBP16.75■□□□□ 0.27
CGREF1-205ENST00000404694 PPP2CBP62714 309 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 PPP2CAP67775 309 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 PARP15Q460N3 678 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 CARD16Q5EG05 197 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 ARSIQ5FYB1 569 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 ZFYVE27Q5T4F4 411 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 PIP5KL1Q5T9C9 394 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 PSAPL1Q6NUJ1 521 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 LAYNQ6UX15 382 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 LEKR1Q6ZMV7 388 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 ZNF354CQ86Y25 554 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 UMODL1-AS1Q8N2C9 162 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 FAM71BQ8TC56 605 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 ARRDC3Q96B67 414 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 HMCESQ96FZ2 354 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 TM6SF2Q9BZW4 377 aa16.75■□□□□ 0.27
CGREF1-205ENST00000404694 TBC1D3DA0A087WVF3 549 aa16.74■□□□□ 0.27
CGREF1-205ENST00000404694 TBC1D3IA0A087WXS9 549 aa16.74■□□□□ 0.27
CGREF1-205ENST00000404694 TBC1D3EA0A087X179 549 aa16.74■□□□□ 0.27
CGREF1-205ENST00000404694 TBC1D3KA0A087X1G2 549 aa16.74■□□□□ 0.27
CGREF1-205ENST00000404694 GOLGA6L10A0A0M3HER8 536 aa16.74■□□□□ 0.27
CGREF1-205ENST00000404694 A0A1B0GVT2 93 aa16.74■□□□□ 0.27
CGREF1-205ENST00000404694 TBC1D3FA6NER0 549 aaPredicted RBP16.74■□□□□ 0.27
CGREF1-205ENST00000404694 ZSCAN5CA6NGD5 496 aaPredicted RBP16.74■□□□□ 0.27
CGREF1-205ENST00000404694 TBC1D3LB9A6J9 549 aa16.74■□□□□ 0.27
CGREF1-205ENST00000404694 RASA4BC9J798 803 aa16.74■□□□□ 0.27
CGREF1-205ENST00000404694 RASA4O43374 803 aa16.74■□□□□ 0.27
CGREF1-205ENST00000404694 LEFTY1O75610 366 aa16.74■□□□□ 0.27
CGREF1-205ENST00000404694 FGGP02679 453 aa16.74■□□□□ 0.27
CGREF1-205ENST00000404694 TBC1D3HP0C7X1 549 aa16.74■□□□□ 0.27
CGREF1-205ENST00000404694 TCF4P15884 667 aa16.74■□□□□ 0.27
CGREF1-205ENST00000404694 CSRP1P21291 193 aaKnown RBP16.74■□□□□ 0.27
CGREF1-205ENST00000404694 KDELR1P24390 212 aa16.74■□□□□ 0.27
CGREF1-205ENST00000404694 NOVA1P51513 510 aaKnown RBP16.74■□□□□ 0.27
CGREF1-205ENST00000404694 TAS2R38P59533 333 aa16.74■□□□□ 0.27
CGREF1-205ENST00000404694 SERINC3Q13530 473 aa16.74■□□□□ 0.27
CGREF1-205ENST00000404694 TEAD4Q15561 434 aa16.74■□□□□ 0.27
CGREF1-205ENST00000404694 TAZQ16635 292 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms