RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 MTF2Q9Y483 593 aaPredicted RBP11.85□□□□□ -0.51
SKA3-203ENST00000400018 TYW5A2RUC4 315 aaKnown RBP11.84□□□□□ -0.51
SKA3-203ENST00000400018 ZNF821O75541 412 aaPredicted RBP11.84□□□□□ -0.51
SKA3-203ENST00000400018 STK10O94804 968 aaKnown RBP11.84□□□□□ -0.51
SKA3-203ENST00000400018 ERVK-10P10266 1014 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 NMBRP28336 390 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 MAPKAPK2P49137 400 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 GAB4Q2WGN9 574 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 PARP15Q460N3 678 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 KDM7AQ6ZMT4 941 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 SYDE1Q6ZW31 735 aaPredicted RBP11.84□□□□□ -0.51
SKA3-203ENST00000400018 CHST9Q7L1S5 443 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 ADIPOR2Q86V24 386 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 LZTR1Q8N653 840 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 FAM136AQ96C01 138 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 RUNDC3BQ96NL0 473 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 GUCD1Q96NT3 240 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 TSGA13Q96PP4 275 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 FSD1LQ9BXM9 530 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 ACE2Q9BYF1 805 aaPredicted RBP11.84□□□□□ -0.51
SKA3-203ENST00000400018 GGA2Q9UJY4 613 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 ANKRD36A6QL64 1941 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 CHD5Q8TDI0 1954 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 ILVBLA1L0T0 632 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 CFAP69A5D8W1 941 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 GOLGA8RI6L899 631 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 KDELR3O43731 214 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 TOP3BO95985 862 aaKnown RBP11.84□□□□□ -0.51
SKA3-203ENST00000400018 CYBBP04839 570 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 ADH5P11766 374 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 ARL4CP56559 192 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 RHOAP61586 193 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 IFFO1Q0D2I5 559 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 KCTD11Q693B1 232 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 DENND5AQ6IQ26 1287 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 ZSWIM9Q86XI8 627 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 PALM2Q8IXS6 379 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 PDIK1LQ8N165 341 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 SMRP1Q8NCR6 262 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 BLOC1S5Q8TDH9 187 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 OSCP1Q8WVF1 389 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 AGAP2Q99490 1192 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 PABPC3Q9H361 631 aaKnown RBP11.84□□□□□ -0.51
SKA3-203ENST00000400018 ECT2Q9H8V3 914 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 PSAT1Q9Y617 370 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 ARL5AQ9Y689 179 aa11.84□□□□□ -0.51
SKA3-203ENST00000400018 TTC4O95801 387 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 HPDP32754 393 aaPredicted RBP11.83□□□□□ -0.52
SKA3-203ENST00000400018 IL10RBQ08334 325 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 KRT71Q3SY84 523 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 KBTBD12Q3ZCT8 623 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 UNC5AQ6ZN44 842 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 CTAGE3PQ8IX95 158 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 FAM217AQ8IXS0 508 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 MAML1Q92585 1016 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 SLC6A17Q9H1V8 727 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 MAGEH1Q9H213 219 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 RAD54BQ9Y620 910 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 CHADO15335 359 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 NCAM2O15394 837 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 AP2A1O95782 977 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 CPP00450 1065 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 PABPC1P11940 636 aaKnown RBP11.83□□□□□ -0.52
SKA3-203ENST00000400018 SRCP12931 536 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 ATP1A2P50993 1020 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 RENBPP51606 427 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 SKOR1P84550 965 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 TRAF2Q12933 501 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 BMPR2Q13873 1038 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 HNRNPDQ14103 355 aaKnown RBP11.83□□□□□ -0.52
SKA3-203ENST00000400018 MBLAC2Q68D91 279 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 RFLNAQ6ZTI6 216 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 CENPUQ71F23 418 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 LPCAT1Q8NF37 534 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 XPO6Q96QU8 1125 aaKnown RBP11.83□□□□□ -0.52
SKA3-203ENST00000400018 GAS2L1Q99501 681 aaPredicted RBP11.83□□□□□ -0.52
SKA3-203ENST00000400018 FAM83CQ9BQN1 747 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 FRMD8P1Q9BZ68 369 aaPredicted RBP11.83□□□□□ -0.52
SKA3-203ENST00000400018 UNKQ9C0B0 810 aaKnown RBP11.83□□□□□ -0.52
SKA3-203ENST00000400018 HEBP1Q9NRV9 189 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 IGSF9Q9P2J2 1179 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 LHX3Q9UBR4 397 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 ZC3H7BQ9UGR2 993 aaKnown RBP11.83□□□□□ -0.52
SKA3-203ENST00000400018 PCDHB9Q9Y5E1 797 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 SPO11Q9Y5K1 396 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 TEX264Q9Y6I9 313 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 DOCK9Q9BZ29 2069 aa11.83□□□□□ -0.52
SKA3-203ENST00000400018 TCF20Q9UGU0 1960 aaKnown RBP11.83□□□□□ -0.52
SKA3-203ENST00000400018 IL9P15248 144 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 GCAP28676 217 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 ABL2P42684 1182 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 DLG2Q15700 870 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 SIRPB2Q5JXA9 342 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 TMCO4Q5TGY1 634 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 ESRP1Q6NXG1 681 aaKnown RBP11.82□□□□□ -0.52
SKA3-203ENST00000400018 SETD3Q86TU7 594 aaPredicted RBP11.82□□□□□ -0.52
SKA3-203ENST00000400018 ACVR1CQ8NER5 493 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 FIBINQ8TAL6 211 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 LMLNQ96KR4 655 aa11.82□□□□□ -0.52
SKA3-203ENST00000400018 TBL1YQ9BQ87 522 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms