RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 CCDC134Q9H6E4 229 aa15.33■□□□□ 0.05
COL25A1-201ENST00000399126 LINC01553A4QN01 128 aa15.33■□□□□ 0.04
COL25A1-201ENST00000399126 OLFM2O95897 454 aa15.33■□□□□ 0.04
COL25A1-201ENST00000399126 CKMP06732 381 aa15.33■□□□□ 0.04
COL25A1-201ENST00000399126 GEMP55040 296 aa15.33■□□□□ 0.04
COL25A1-201ENST00000399126 CAMK1Q14012 370 aa15.33■□□□□ 0.04
COL25A1-201ENST00000399126 HSP90AA5PQ58FG0 334 aa15.33■□□□□ 0.04
COL25A1-201ENST00000399126 RABGAP1LQ5R372 815 aa15.33■□□□□ 0.04
COL25A1-201ENST00000399126 LVRNQ6Q4G3 990 aa15.33■□□□□ 0.04
COL25A1-201ENST00000399126 RANBP10Q6VN20 620 aa15.33■□□□□ 0.04
COL25A1-201ENST00000399126 PACS1Q6VY07 963 aa15.33■□□□□ 0.04
COL25A1-201ENST00000399126 MARK2Q7KZI7 788 aaKnown RBP15.33■□□□□ 0.04
COL25A1-201ENST00000399126 RNF135Q8IUD6 432 aa15.33■□□□□ 0.04
COL25A1-201ENST00000399126 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.33■□□□□ 0.04
COL25A1-201ENST00000399126 ARRDC2Q8TBH0 407 aa15.33■□□□□ 0.04
COL25A1-201ENST00000399126 SPPL3Q8TCT6 385 aa15.33■□□□□ 0.04
COL25A1-201ENST00000399126 EXOC2Q96KP1 924 aa15.33■□□□□ 0.04
COL25A1-201ENST00000399126 NAT9Q9BTE0 207 aa15.33■□□□□ 0.04
COL25A1-201ENST00000399126 IL22Q9GZX6 179 aa15.33■□□□□ 0.04
COL25A1-201ENST00000399126 SLC2A6Q9UGQ3 507 aa15.33■□□□□ 0.04
COL25A1-201ENST00000399126 SMG5Q9UPR3 1016 aaKnown RBP15.33■□□□□ 0.04
COL25A1-201ENST00000399126 USP1O94782 785 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 SNRPAP09012 282 aaKnown RBP15.32■□□□□ 0.04
COL25A1-201ENST00000399126 MYL4P12829 197 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 PPP3CCP48454 512 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 YBEYP58557 167 aaPredicted RBP15.32■□□□□ 0.04
COL25A1-201ENST00000399126 CREMQ03060 361 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 SPANXN3Q5MJ09 141 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 CXorf57Q6NSI4 855 aaKnown RBP15.32■□□□□ 0.04
COL25A1-201ENST00000399126 CPLX4Q7Z7G2 160 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 CCNJLQ8IV13 435 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 MRPL43Q8N983 215 aaKnown RBP15.32■□□□□ 0.04
COL25A1-201ENST00000399126 WFDC5Q8TCV5 224 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 MAGEC3Q8TD91 643 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 NSMCE3Q96MG7 304 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 PLEKHG4BQ96PX9 1271 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 PLSCR2Q9NRY7 297 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 FGFR1OP2Q9NVK5 253 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 ZFATQ9P243 1243 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 SOX13Q9UN79 622 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 GBF1Q92538 1859 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 WDR91A4D1P6 747 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 SRRM3A6NNA2 597 aaPredicted RBP15.32■□□□□ 0.04
COL25A1-201ENST00000399126 KRT37O76014 449 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 GLUD1P00367 558 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 NPY2RP49146 381 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 MGAT5Q09328 741 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 CYS1Q717R9 158 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 SPATA21Q7Z572 469 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 LINC00523Q86TU6 105 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 GPR65Q8IYL9 337 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 TGS1Q96RS0 853 aaKnown RBP15.32■□□□□ 0.04
COL25A1-201ENST00000399126 SEMA3CQ99985 751 aa15.32■□□□□ 0.04
COL25A1-201ENST00000399126 FAM237BA0A1B0GVD1 139 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 TRIM64CA6NLI5 447 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 GRM6O15303 877 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 KIAA0754O94854 1291 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 ZNF16P17020 682 aaPredicted RBP15.31■□□□□ 0.04
COL25A1-201ENST00000399126 RGRP47804 291 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 TRPC1P48995 793 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 ACBD5Q5T8D3 534 aaPredicted RBP15.31■□□□□ 0.04
COL25A1-201ENST00000399126 MYLK4Q86YV6 388 aaPredicted RBP15.31■□□□□ 0.04
COL25A1-201ENST00000399126 EZH1Q92800 747 aaPredicted RBP15.31■□□□□ 0.04
COL25A1-201ENST00000399126 FATE1Q969F0 183 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 TCEAL4Q96EI5 215 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 NOTCH4Q99466 2003 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 SLC13A1Q9BZW2 595 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 PCMTD2Q9NV79 361 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 RABL2AQ9UBK7 228 aaPredicted RBP15.31■□□□□ 0.04
COL25A1-201ENST00000399126 A0A1B0GVM2 712 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 TCAF2A6NFQ2 919 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 LPXNO60711 386 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 TBL1XO60907 577 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 CLDN11O75508 207 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 RHOCP08134 193 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 GBP2P32456 591 aaPredicted RBP15.31■□□□□ 0.04
COL25A1-201ENST00000399126 SLC18A2Q05940 514 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 C9orf50Q5SZB4 431 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 ESRP1Q6NXG1 681 aaKnown RBP15.31■□□□□ 0.04
COL25A1-201ENST00000399126 LINGO4Q6UY18 593 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 NSMCE1Q8WV22 266 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 MRPS31Q92665 395 aaKnown RBP15.31■□□□□ 0.04
COL25A1-201ENST00000399126 ATP13A1Q9HD20 1204 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 TLR9Q9NR96 1032 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 C20orf96Q9NUD7 363 aaPredicted RBP15.31■□□□□ 0.04
COL25A1-201ENST00000399126 MKS1Q9NXB0 559 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 PLK2Q9NYY3 685 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 SSX2IPQ9Y2D8 614 aa15.31■□□□□ 0.04
COL25A1-201ENST00000399126 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.3■□□□□ 0.04
COL25A1-201ENST00000399126 E2F8A0AVK6 867 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 ENO4A6NNW6 628 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 CBX4O00257 560 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 SNAP91O60641 907 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 KRT38O76015 456 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 C1RP00736 705 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 ALDOAP04075 364 aaKnown RBP15.3■□□□□ 0.04
COL25A1-201ENST00000399126 PRKCGP05129 697 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 TAC1P20366 129 aa15.3■□□□□ 0.04
COL25A1-201ENST00000399126 MZF1P28698 734 aaPredicted RBP15.3■□□□□ 0.04
COL25A1-201ENST00000399126 CLCN4P51793 760 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms