RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 TMC3Q7Z5M5 1100 aa11.73□□□□□ -0.53
HLCS-202ENST00000399120 PACS2Q86VP3 889 aa11.73□□□□□ -0.53
HLCS-202ENST00000399120 SFRP1Q8N474 314 aa11.73□□□□□ -0.53
HLCS-202ENST00000399120 TMEM51Q9NW97 253 aa11.73□□□□□ -0.53
HLCS-202ENST00000399120 ZNHIT2Q9UHR6 403 aa11.73□□□□□ -0.53
HLCS-202ENST00000399120 SCAF8Q9UPN6 1271 aaKnown RBP11.73□□□□□ -0.53
HLCS-202ENST00000399120 GNRH1P01148 92 aa11.73□□□□□ -0.53
HLCS-202ENST00000399120 NR2F6P10588 404 aa11.73□□□□□ -0.53
HLCS-202ENST00000399120 AKT2P31751 481 aa11.73□□□□□ -0.53
HLCS-202ENST00000399120 HSPA14Q0VDF9 509 aa11.73□□□□□ -0.53
HLCS-202ENST00000399120 PTCHD4Q6ZW05 846 aa11.73□□□□□ -0.53
HLCS-202ENST00000399120 APTXQ7Z2E3 356 aaKnown RBP11.73□□□□□ -0.53
HLCS-202ENST00000399120 NET1Q7Z628 596 aaPredicted RBP11.73□□□□□ -0.53
HLCS-202ENST00000399120 TTC7BQ86TV6 843 aa11.73□□□□□ -0.53
HLCS-202ENST00000399120 NKX2-3Q8TAU0 364 aa11.73□□□□□ -0.53
HLCS-202ENST00000399120 TBC1D3BA6NDS4 549 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 AMHP03971 560 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 HSD3B2P26439 372 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 SULT1C3Q6IMI6 304 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 ATG9AQ7Z3C6 839 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 SLC4A11Q8NBS3 891 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 OR5T3Q8NGG3 340 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 PMM1Q92871 262 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 MTG1Q9BT17 334 aaPredicted RBP11.72□□□□□ -0.53
HLCS-202ENST00000399120 RAPGEFL1Q9UHV5 662 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 GAKO14976 1311 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 NKRFO15226 690 aaKnown RBP eCLIP11.72□□□□□ -0.53
HLCS-202ENST00000399120 AVILO75366 819 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 RSL1D1O76021 490 aaKnown RBP11.72□□□□□ -0.53
HLCS-202ENST00000399120 PECAM1P16284 738 aaPredicted RBP11.72□□□□□ -0.53
HLCS-202ENST00000399120 GSTT1P30711 240 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 DEF8Q6ZN54 512 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 TEFMQ96QE5 360 aaKnown RBP11.72□□□□□ -0.53
HLCS-202ENST00000399120 SAMHD1Q9Y3Z3 626 aaKnown RBP11.72□□□□□ -0.53
HLCS-202ENST00000399120 KCNK1O00180 336 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 CASKO14936 926 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 SLC28A2O43868 658 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 PEX11AO75192 247 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 RPL21P46778 160 aaKnown RBP11.72□□□□□ -0.53
HLCS-202ENST00000399120 PDX1P52945 283 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 NAA20P61599 178 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 RAET1GQ6H3X3 334 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 ZNF563Q8TA94 476 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 ADAM32Q8TC27 787 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 ACTL7BQ9Y614 415 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 CSH1P0DML2 217 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 CSH2P0DML3 217 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 ARL3P36405 182 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 DNAJB14Q8TBM8 379 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 PIH1D2Q8WWB5 315 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 TKTL2Q9H0I9 626 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 CST11Q9H112 138 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 ASB8Q9H765 288 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 SPAG4Q9NPE6 437 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 C8orf4Q9NR00 106 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 RAB23Q9ULC3 237 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 PCP4L1A6NKN8 68 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 GLI1P08151 1106 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 ZNF286BP0CG31 522 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 TUFMP49411 452 aaKnown RBP11.72□□□□□ -0.53
HLCS-202ENST00000399120 PFKPQ01813 784 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 LSM12Q3MHD2 195 aaKnown RBP11.72□□□□□ -0.53
HLCS-202ENST00000399120 RNASE12Q5GAN4 147 aaKnown RBP11.72□□□□□ -0.53
HLCS-202ENST00000399120 C16orf46Q6P387 395 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 TPGS1Q6ZTW0 290 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 AKAP14Q86UN6 197 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 GRIN3AQ8TCU5 1115 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 FAR1Q8WVX9 515 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 BSNDQ8WZ55 320 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 CHCHD6Q9BRQ6 235 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 ZFP14Q9HCL3 533 aa11.72□□□□□ -0.53
HLCS-202ENST00000399120 ARP10275 920 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 ZNF135P52742 658 aaPredicted RBP11.71□□□□□ -0.53
HLCS-202ENST00000399120 SNRPD1P62314 119 aaKnown RBP11.71□□□□□ -0.53
HLCS-202ENST00000399120 PDK3Q15120 406 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 LYPLAL1Q5VWZ2 237 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 DEFB106AQ8N104 65 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 ITCHQ96J02 903 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 PLA2G12BQ9BX93 195 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 XPR1Q9UBH6 696 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 LOC110117498-PIK3R3F6TDL0 507 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 FFAR3O14843 346 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 GPR42O15529 346 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 ALDH5A1P51649 535 aaPredicted RBP11.71□□□□□ -0.53
HLCS-202ENST00000399120 PARP6Q2NL67 630 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 FIGNQ5HY92 759 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 TRIM40Q6P9F5 258 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 MOXD1Q6UVY6 613 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 GPR156Q8NFN8 814 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 MRPL9Q9BYD2 267 aaKnown RBP11.71□□□□□ -0.53
HLCS-202ENST00000399120 IL22Q9GZX6 179 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 CCNB1IP1Q9NPC3 277 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 C12orf4Q9NQ89 552 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 SMCO3A2RU48 225 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 FTH1P02794 183 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 ITPKBP27987 946 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 POU5F1Q01860 360 aaKnown RBP11.71□□□□□ -0.53
HLCS-202ENST00000399120 AP5B1Q2VPB7 878 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 SLC39A12Q504Y0 691 aa11.71□□□□□ -0.53
HLCS-202ENST00000399120 XKR6Q5GH73 641 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms