RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 FAM72DQ6L9T8 149 aa12.23□□□□□ -0.45
TFF3-202ENST00000398431 CRTC1Q6UUV9 634 aa12.23□□□□□ -0.45
TFF3-202ENST00000398431 EFL1Q7Z2Z2 1120 aaKnown RBP12.23□□□□□ -0.45
TFF3-202ENST00000398431 FAM72BQ86X60 149 aa12.23□□□□□ -0.45
TFF3-202ENST00000398431 EMC1Q8N766 993 aa12.23□□□□□ -0.45
TFF3-202ENST00000398431 OR6K2Q8NGY2 324 aa12.23□□□□□ -0.45
TFF3-202ENST00000398431 LMX1AQ8TE12 382 aa12.23□□□□□ -0.45
TFF3-202ENST00000398431 KCNE4Q8WWG9 221 aa12.23□□□□□ -0.45
TFF3-202ENST00000398431 CPA5Q8WXQ8 436 aa12.23□□□□□ -0.45
TFF3-202ENST00000398431 ARHGEF2Q92974 986 aaKnown RBP12.23□□□□□ -0.45
TFF3-202ENST00000398431 BOCQ9BWV1 1114 aa12.23□□□□□ -0.45
TFF3-202ENST00000398431 DPH1Q9BZG8 443 aa12.23□□□□□ -0.45
TFF3-202ENST00000398431 CLPBQ9H078 707 aa12.23□□□□□ -0.45
TFF3-202ENST00000398431 ZDHHC6Q9H6R6 413 aa12.23□□□□□ -0.45
TFF3-202ENST00000398431 LMBRD1Q9NUN5 540 aa12.23□□□□□ -0.45
TFF3-202ENST00000398431 IPO11Q9UI26 975 aaKnown RBP12.23□□□□□ -0.45
TFF3-202ENST00000398431 NEU3Q9UQ49 428 aa12.23□□□□□ -0.45
TFF3-202ENST00000398431 ITM2BQ9Y287 266 aa12.23□□□□□ -0.45
TFF3-202ENST00000398431 ATMQ13315 3056 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 CDRT15L2A8MXV6 281 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 MMEP08473 750 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 TMPRSS3P57727 454 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 UBE2HP62256 183 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 NOMO3P69849 1222 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 ATP11AP98196 1134 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 VAC14Q08AM6 782 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 C15orf59Q2T9L4 293 aaPredicted RBP12.22□□□□□ -0.45
TFF3-202ENST00000398431 MYLK3Q32MK0 819 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 CCDC14Q49A88 953 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 C3orf38Q5JPI3 329 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 BROXQ5VW32 411 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 LEKR1Q6ZMV7 388 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 ZSCAN30Q86W11 494 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 SLC35F3Q8IY50 421 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 MLKLQ8NB16 471 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 DENND6BQ8NEG7 585 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 RAB7BQ96AH8 199 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 GRAMD1AQ96CP6 724 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 KLHL32Q96NJ5 620 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 IL12RB2Q99665 862 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 TUBGCP2Q9BSJ2 902 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 PDCL3Q9H2J4 239 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 MBNL1Q9NR56 388 aaKnown RBP12.22□□□□□ -0.45
TFF3-202ENST00000398431 OR12D3Q9UGF7 316 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 DNAI1Q9UI46 699 aa12.22□□□□□ -0.45
TFF3-202ENST00000398431 H3BM21 787 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 YY2O15391 372 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 MMP20O60882 483 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 LRIG2O94898 1065 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 POP4O95707 220 aaKnown RBP12.21□□□□□ -0.45
TFF3-202ENST00000398431 GSRP00390 522 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 UGT2B4P06133 528 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 UCHL3P15374 230 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 TIMP2P16035 220 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 RHOQP17081 205 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 CHRNB2P17787 502 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 IGFALSP35858 605 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 PDX1P52945 283 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 UCNP55089 124 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 ADKP55263 362 aaKnown RBP12.21□□□□□ -0.45
TFF3-202ENST00000398431 RAPGEF1Q13905 1077 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 LY6DQ14210 128 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 NR0B2Q15466 257 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 TAF1BQ53T94 588 aaPredicted RBP12.21□□□□□ -0.45
TFF3-202ENST00000398431 ATXN7L2Q5T6C5 722 aaPredicted RBP12.21□□□□□ -0.45
TFF3-202ENST00000398431 NAA35Q5VZE5 725 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 PHLDB2Q86SQ0 1253 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 NETO2Q8NC67 525 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 OR2AP1Q8NGE2 309 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 TPCN2Q8NHX9 752 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 JOSD2Q8TAC2 188 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 EPS8L1Q8TE68 723 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 RXFP2Q8WXD0 754 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 MAGEH1Q9H213 219 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 RETREG1Q9H6L5 497 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 NOL6Q9H6R4 1146 aaKnown RBP12.21□□□□□ -0.45
TFF3-202ENST00000398431 ASH1LQ9NR48 2969 aaKnown RBP12.21□□□□□ -0.45
TFF3-202ENST00000398431 METTL5Q9NRN9 209 aaKnown RBP12.21□□□□□ -0.45
TFF3-202ENST00000398431 THSD1Q9NS62 852 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 EVA1BQ9NVM1 165 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 TMEM248Q9NWD8 314 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 SPASTQ9UBP0 616 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 PCDHGA8Q9Y5G5 932 aa12.21□□□□□ -0.45
TFF3-202ENST00000398431 LMO7DNF2Z398 122 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 K7ENP7 123 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 KRIT1O00522 736 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 NTN3O00634 580 aaPredicted RBP12.2□□□□□ -0.46
TFF3-202ENST00000398431 RIOK3O14730 519 aaKnown RBP12.2□□□□□ -0.46
TFF3-202ENST00000398431 MUSKO15146 869 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 EFSO43281 561 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 KDELR3O43731 214 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 GJB6O95452 261 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 LSM8O95777 96 aaKnown RBP12.2□□□□□ -0.46
TFF3-202ENST00000398431 CYP1A1P04798 512 aaPredicted RBP12.2□□□□□ -0.46
TFF3-202ENST00000398431 CELA2BP08218 269 aaPredicted RBP12.2□□□□□ -0.46
TFF3-202ENST00000398431 TSHRP16473 764 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 RBMS1P29558 406 aaKnown RBP12.2□□□□□ -0.46
TFF3-202ENST00000398431 MAPKAPK2P49137 400 aa12.2□□□□□ -0.46
TFF3-202ENST00000398431 SNRPD1P62314 119 aaKnown RBP12.2□□□□□ -0.46
TFF3-202ENST00000398431 YPEL5P62699 121 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms