RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 WASF3Q9UPY6 502 aa25.83■■□□□ 1.73
U2AF1-203ENST00000398137 JRKLQ9Y4A0 524 aa25.83■■□□□ 1.73
U2AF1-203ENST00000398137 CXorf51AA0A1B0GTR3 108 aa25.82■■□□□ 1.72
U2AF1-203ENST00000398137 BNIP3LO60238 219 aa25.82■■□□□ 1.72
U2AF1-203ENST00000398137 MAFKO60675 156 aa25.82■■□□□ 1.72
U2AF1-203ENST00000398137 GJB3O75712 270 aa25.82■■□□□ 1.72
U2AF1-203ENST00000398137 ACADMP11310 421 aa25.82■■□□□ 1.72
U2AF1-203ENST00000398137 CEACAM1P13688 526 aa25.82■■□□□ 1.72
U2AF1-203ENST00000398137 MX2P20592 715 aa25.82■■□□□ 1.72
U2AF1-203ENST00000398137 GNG11P61952 73 aa25.82■■□□□ 1.72
U2AF1-203ENST00000398137 SHC2P98077 582 aa25.82■■□□□ 1.72
U2AF1-203ENST00000398137 HS1BP3Q53T59 392 aa25.82■■□□□ 1.72
U2AF1-203ENST00000398137 SYCP2LQ5T4T6 812 aa25.82■■□□□ 1.72
U2AF1-203ENST00000398137 MINDY1Q8N5J2 469 aa25.82■■□□□ 1.72
U2AF1-203ENST00000398137 CARD9Q9H257 536 aa25.82■■□□□ 1.72
U2AF1-203ENST00000398137 C6orf106Q9H6K1 298 aaPredicted RBP25.82■■□□□ 1.72
U2AF1-203ENST00000398137 EFR3BQ9Y2G0 817 aa25.82■■□□□ 1.72
U2AF1-203ENST00000398137 SPEGQ15772 3267 aa25.81■■□□□ 1.72
U2AF1-203ENST00000398137 ATP1A1P05023 1023 aaKnown RBP25.81■■□□□ 1.72
U2AF1-203ENST00000398137 BNC1Q01954 994 aa25.81■■□□□ 1.72
U2AF1-203ENST00000398137 WDR45BQ5MNZ6 344 aa25.81■■□□□ 1.72
U2AF1-203ENST00000398137 C9orf64Q5T6V5 341 aa25.81■■□□□ 1.72
U2AF1-203ENST00000398137 TMCO4Q5TGY1 634 aa25.81■■□□□ 1.72
U2AF1-203ENST00000398137 LRRC49Q8IUZ0 686 aa25.81■■□□□ 1.72
U2AF1-203ENST00000398137 P3H4Q92791 437 aa25.81■■□□□ 1.72
U2AF1-203ENST00000398137 PTPRN2Q92932 1015 aa25.81■■□□□ 1.72
U2AF1-203ENST00000398137 OLFM3Q96PB7 478 aa25.81■■□□□ 1.72
U2AF1-203ENST00000398137 TM6SF2Q9BZW4 377 aa25.81■■□□□ 1.72
U2AF1-203ENST00000398137 CEP44Q9C0F1 390 aa25.81■■□□□ 1.72
U2AF1-203ENST00000398137 RSPH9Q9H1X1 276 aaPredicted RBP25.81■■□□□ 1.72
U2AF1-203ENST00000398137 MEI4A8MW99 385 aa25.8■■□□□ 1.72
U2AF1-203ENST00000398137 TJP3O95049 919 aa25.8■■□□□ 1.72
U2AF1-203ENST00000398137 CD59P13987 128 aa25.8■■□□□ 1.72
U2AF1-203ENST00000398137 PDK1Q15118 436 aa25.8■■□□□ 1.72
U2AF1-203ENST00000398137 STK40Q8N2I9 435 aa25.8■■□□□ 1.72
U2AF1-203ENST00000398137 ZCCHC9Q8N567 271 aaKnown RBP25.8■■□□□ 1.72
U2AF1-203ENST00000398137 PCDH20Q8N6Y1 951 aaKnown RBP25.8■■□□□ 1.72
U2AF1-203ENST00000398137 CCNYQ8ND76 341 aa25.8■■□□□ 1.72
U2AF1-203ENST00000398137 CASKIN2Q8WXE0 1202 aa25.8■■□□□ 1.72
U2AF1-203ENST00000398137 HDAC11Q96DB2 347 aa25.8■■□□□ 1.72
U2AF1-203ENST00000398137 WDR24Q96S15 920 aa25.8■■□□□ 1.72
U2AF1-203ENST00000398137 LGMNQ99538 433 aa25.8■■□□□ 1.72
U2AF1-203ENST00000398137 FBRSQ9HAH7 460 aa25.8■■□□□ 1.72
U2AF1-203ENST00000398137 DNAAF2Q9NVR5 837 aaKnown RBP25.8■■□□□ 1.72
U2AF1-203ENST00000398137 CHD8Q9HCK8 2581 aa25.8■■□□□ 1.72
U2AF1-203ENST00000398137 TARSL2A2RTX5 802 aaKnown RBP25.79■■□□□ 1.72
U2AF1-203ENST00000398137 UPK3BL1B0FP48 263 aa25.79■■□□□ 1.72
U2AF1-203ENST00000398137 UPK3BL2E5RIL1 263 aa25.79■■□□□ 1.72
U2AF1-203ENST00000398137 APOC4-APOC2K7ER74 178 aa25.79■■□□□ 1.72
U2AF1-203ENST00000398137 ZNF821O75541 412 aaPredicted RBP25.79■■□□□ 1.72
U2AF1-203ENST00000398137 PEX11BO96011 259 aa25.79■■□□□ 1.72
U2AF1-203ENST00000398137 APOC2P02655 101 aa25.79■■□□□ 1.72
U2AF1-203ENST00000398137 CXCR5P32302 372 aa25.79■■□□□ 1.72
U2AF1-203ENST00000398137 NR2C2P49116 596 aa25.79■■□□□ 1.72
U2AF1-203ENST00000398137 RHOAP61586 193 aa25.79■■□□□ 1.72
U2AF1-203ENST00000398137 GRIK2Q13002 908 aa25.79■■□□□ 1.72
U2AF1-203ENST00000398137 CYTH1Q15438 398 aa25.79■■□□□ 1.72
U2AF1-203ENST00000398137 INO80DQ53TQ3 878 aaPredicted RBP25.79■■□□□ 1.72
U2AF1-203ENST00000398137 B4GALNT4Q76KP1 1039 aa25.79■■□□□ 1.72
U2AF1-203ENST00000398137 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.79■■□□□ 1.72
U2AF1-203ENST00000398137 SERGEFQ9UGK8 458 aa25.79■■□□□ 1.72
U2AF1-203ENST00000398137 SUSD2Q9UGT4 822 aa25.79■■□□□ 1.72
U2AF1-203ENST00000398137 EIF2B4Q9UI10 523 aaKnown RBP25.79■■□□□ 1.72
U2AF1-203ENST00000398137 ANGPTL2Q9UKU9 493 aa25.79■■□□□ 1.72
U2AF1-203ENST00000398137 ZKSCAN5Q9Y2L8 839 aa25.79■■□□□ 1.72
U2AF1-203ENST00000398137 A0A1B0GTW7 788 aa25.78■■□□□ 1.72
U2AF1-203ENST00000398137 TCRBV7S2A1N4TA0A589 114 aa25.78■■□□□ 1.72
U2AF1-203ENST00000398137 PPP1R12AO14974 1030 aaPredicted RBP25.78■■□□□ 1.72
U2AF1-203ENST00000398137 TOP3BO95985 862 aaKnown RBP25.78■■□□□ 1.72
U2AF1-203ENST00000398137 ZBTB16Q05516 673 aa25.78■■□□□ 1.72
U2AF1-203ENST00000398137 LBRQ14739 615 aaKnown RBP25.78■■□□□ 1.72
U2AF1-203ENST00000398137 ATXN7L2Q5T6C5 722 aaPredicted RBP25.78■■□□□ 1.72
U2AF1-203ENST00000398137 TIGD7Q6NT04 549 aaPredicted RBP25.78■■□□□ 1.72
U2AF1-203ENST00000398137 OR2A12Q8NGT7 310 aa25.78■■□□□ 1.72
U2AF1-203ENST00000398137 ISG20Q96AZ6 181 aaKnown RBP25.78■■□□□ 1.72
U2AF1-203ENST00000398137 ZNF599Q96NL3 588 aa25.78■■□□□ 1.72
U2AF1-203ENST00000398137 TSGA13Q96PP4 275 aa25.78■■□□□ 1.72
U2AF1-203ENST00000398137 FAM118BQ9BPY3 351 aa25.78■■□□□ 1.72
U2AF1-203ENST00000398137 ORAI3Q9BRQ5 295 aa25.78■■□□□ 1.72
U2AF1-203ENST00000398137 CINPQ9BW66 212 aaPredicted RBP25.78■■□□□ 1.72
U2AF1-203ENST00000398137 LHX3Q9UBR4 397 aa25.78■■□□□ 1.72
U2AF1-203ENST00000398137 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.78■■□□□ 1.72
U2AF1-203ENST00000398137 SHROOM3Q8TF72 1996 aa25.78■■□□□ 1.72
U2AF1-203ENST00000398137 MAP1BP46821 2468 aaKnown RBP25.77■■□□□ 1.72
U2AF1-203ENST00000398137 SYPP08247 313 aa25.77■■□□□ 1.72
U2AF1-203ENST00000398137 GNSP15586 552 aa25.77■■□□□ 1.72
U2AF1-203ENST00000398137 RECQLP46063 649 aaPredicted RBP25.77■■□□□ 1.72
U2AF1-203ENST00000398137 ATXN3P54252 364 aaPredicted RBP25.77■■□□□ 1.72
U2AF1-203ENST00000398137 FAM193AP78312 1265 aa25.77■■□□□ 1.72
U2AF1-203ENST00000398137 OTUD4Q01804 1114 aaKnown RBP25.77■■□□□ 1.72
U2AF1-203ENST00000398137 PPIDQ08752 370 aaKnown RBP25.77■■□□□ 1.72
U2AF1-203ENST00000398137 SLC10A7Q0GE19 358 aa25.77■■□□□ 1.72
U2AF1-203ENST00000398137 ELAVL3Q14576 367 aaKnown RBP25.77■■□□□ 1.72
U2AF1-203ENST00000398137 RFTN1Q14699 578 aaPredicted RBP25.77■■□□□ 1.72
U2AF1-203ENST00000398137 NOMO1Q15155 1222 aa25.77■■□□□ 1.72
U2AF1-203ENST00000398137 ZNF776Q68DI1 518 aaPredicted RBP25.77■■□□□ 1.72
U2AF1-203ENST00000398137 BZW1Q7L1Q6 419 aaKnown RBP25.77■■□□□ 1.72
U2AF1-203ENST00000398137 CCDC13Q8IYE1 715 aa25.77■■□□□ 1.72
U2AF1-203ENST00000398137 ACTL9Q8TC94 416 aa25.77■■□□□ 1.72
U2AF1-203ENST00000398137 NSMCE1Q8WV22 266 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms