RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 DUSP15Q9H1R2 295 aaPredicted RBP25.69■■□□□ 1.7
TMEM55B-202ENST00000398020 EPC1Q9H2F5 836 aa25.69■■□□□ 1.7
TMEM55B-202ENST00000398020 DYRK4Q9NR20 520 aa25.69■■□□□ 1.7
TMEM55B-202ENST00000398020 R3HDM2Q9Y2K5 976 aaKnown RBP25.69■■□□□ 1.7
TMEM55B-202ENST00000398020 H7C0C1 242 aa25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 ATP1A1P05023 1023 aaKnown RBP25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 HLA-DQB2P05538 268 aa25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 OXTRP30559 389 aa25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 ATP5OP48047 213 aa25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 PLK5Q496M5 336 aa25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 CAMK1DQ8IU85 385 aa25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 QKIQ96PU8 341 aaKnown RBP eCLIP25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 BTBD1Q9H0C5 482 aa25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 FAM47DPA6NHR8 397 aa25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 NDUFS2O75306 463 aa25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 HSPA9P38646 679 aaKnown RBP25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 CSNK1DP48730 415 aa25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 EIF3EP60228 445 aaKnown RBP25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 IFI35P80217 286 aaPredicted RBP25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 ZNF33AQ06730 810 aa25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 ARMCX6Q7L4S7 300 aa25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 SLC13A5Q86YT5 568 aaPredicted RBP25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 PPP1R16AQ96I34 528 aa25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 LRIG1Q96JA1 1093 aa25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 NOD2Q9HC29 1040 aa25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 SCUBE2Q9NQ36 999 aa25.68■■□□□ 1.7
TMEM55B-202ENST00000398020 SPAG17Q6Q759 2223 aa25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 CR2P20023 1033 aa25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 ITGB7P26010 798 aa25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 MSNP26038 577 aaKnown RBP25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 GNG11P61952 73 aa25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 SFSWAPQ12872 951 aaKnown RBP25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 ZNF805Q5CZA5 627 aa25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 AGBL4Q5VU57 503 aa25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 SLC36A4Q6YBV0 504 aa25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 PARS2Q7L3T8 475 aaKnown RBP25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 CNTD1Q8N815 330 aa25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 OR14C36Q8NHC7 312 aa25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 AGAP3Q96P47 875 aa25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 NUDCD1Q96RS6 583 aa25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 IL12RB2Q99665 862 aa25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 SEMA3CQ99985 751 aa25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 OSBPL1AQ9BXW6 950 aa25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 CPEB1Q9BZB8 566 aaKnown RBP25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 POLR1EQ9GZS1 481 aaKnown RBP25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 FZD4Q9ULV1 537 aa25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 SMG5Q9UPR3 1016 aaKnown RBP25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 THADAQ6YHU6 1953 aa25.67■■□□□ 1.7
TMEM55B-202ENST00000398020 ANKRD36A6QL64 1941 aa25.66■■□□□ 1.7
TMEM55B-202ENST00000398020 CEP104O60308 925 aa25.66■■□□□ 1.7
TMEM55B-202ENST00000398020 SLC45A4Q5BKX6 768 aa25.66■■□□□ 1.7
TMEM55B-202ENST00000398020 PIP5KL1Q5T9C9 394 aa25.66■■□□□ 1.7
TMEM55B-202ENST00000398020 ERN2Q76MJ5 926 aaKnown RBP25.66■■□□□ 1.7
TMEM55B-202ENST00000398020 ATP13A3Q9H7F0 1226 aa25.66■■□□□ 1.7
TMEM55B-202ENST00000398020 PRR23AA6NEV1 266 aa25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 C16orf96A6NNT2 1141 aa25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 SEMA4FO95754 770 aa25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 RBP3P10745 1247 aa25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 RBL1P28749 1068 aa25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 ADPRHP54922 357 aa25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 AP1S1P61966 158 aa25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 DSC2Q02487 901 aa25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 XRCC4Q13426 336 aa25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 ELF2Q15723 593 aa25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 LRRC73Q5JTD7 316 aa25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 PMS2CLQ68D20 193 aa25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 NCEH1Q6PIU2 408 aa25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 LPCAT2Q7L5N7 544 aa25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 ATG4AQ8WYN0 398 aa25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 ZC3H10Q96K80 434 aaKnown RBP25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 WDR24Q96S15 920 aa25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 C6orf106Q9H6K1 298 aaPredicted RBP25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 ARIH1Q9Y4X5 557 aaPredicted RBP25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 PCDHGC4Q9Y5F7 938 aa25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 GPR179Q6PRD1 2367 aa25.65■■□□□ 1.7
TMEM55B-202ENST00000398020 HACD1B0YJ81 288 aa25.64■■□□□ 1.7
TMEM55B-202ENST00000398020 PTPN3P26045 913 aa25.64■■□□□ 1.7
TMEM55B-202ENST00000398020 PTGER3P43115 390 aa25.64■■□□□ 1.7
TMEM55B-202ENST00000398020 BCL2L1Q07817 233 aa25.64■■□□□ 1.7
TMEM55B-202ENST00000398020 WASHC5Q12768 1159 aa25.64■■□□□ 1.7
TMEM55B-202ENST00000398020 FBXL19Q6PCT2 694 aa25.64■■□□□ 1.7
TMEM55B-202ENST00000398020 C11orf74Q86VG3 221 aa25.64■■□□□ 1.7
TMEM55B-202ENST00000398020 SUMF1Q8NBK3 374 aa25.64■■□□□ 1.7
TMEM55B-202ENST00000398020 TTC13Q8NBP0 860 aa25.64■■□□□ 1.7
TMEM55B-202ENST00000398020 HTR3CQ8WXA8 447 aa25.64■■□□□ 1.7
TMEM55B-202ENST00000398020 HDAC8Q9BY41 377 aa25.64■■□□□ 1.7
TMEM55B-202ENST00000398020 SUV39H2Q9H5I1 410 aa25.64■■□□□ 1.7
TMEM55B-202ENST00000398020 SGK2Q9HBY8 427 aa25.64■■□□□ 1.7
TMEM55B-202ENST00000398020 RAB23Q9ULC3 237 aa25.64■■□□□ 1.7
TMEM55B-202ENST00000398020 ATP8A1Q9Y2Q0 1164 aa25.64■■□□□ 1.7
TMEM55B-202ENST00000398020 CEP192Q8TEP8 1941 aa25.64■■□□□ 1.7
TMEM55B-202ENST00000398020 FGGP02679 453 aa25.64■■□□□ 1.69
TMEM55B-202ENST00000398020 SERPINA4P29622 427 aa25.64■■□□□ 1.69
TMEM55B-202ENST00000398020 DHPSP49366 369 aaPredicted RBP25.64■■□□□ 1.69
TMEM55B-202ENST00000398020 NEK3P51956 506 aa25.64■■□□□ 1.69
TMEM55B-202ENST00000398020 TAS2R38P59533 333 aa25.64■■□□□ 1.69
TMEM55B-202ENST00000398020 GRM3Q14832 879 aa25.64■■□□□ 1.69
TMEM55B-202ENST00000398020 DARS2Q6PI48 645 aaKnown RBP25.64■■□□□ 1.69
TMEM55B-202ENST00000398020 FAM131CQ96AQ9 280 aa25.64■■□□□ 1.69
TMEM55B-202ENST00000398020 TUBGCP5Q96RT8 1024 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms