RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 SGF29Q96ES7 293 aa24.04■■□□□ 1.44
PABPN1-202ENST00000397276 C1QTNF1Q9BXJ1 281 aa24.04■■□□□ 1.44
PABPN1-202ENST00000397276 WDR55Q9H6Y2 383 aaPredicted RBP24.04■■□□□ 1.44
PABPN1-202ENST00000397276 NT5MQ9NPB1 228 aa24.04■■□□□ 1.44
PABPN1-202ENST00000397276 OXSMQ9NWU1 459 aa24.04■■□□□ 1.44
PABPN1-202ENST00000397276 GMIPQ9P107 970 aa24.04■■□□□ 1.44
PABPN1-202ENST00000397276 CDY1Q9Y6F8 540 aa24.04■■□□□ 1.44
PABPN1-202ENST00000397276 AP3B1O00203 1094 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 HOXC13P31276 330 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 SLC1A2P43004 574 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 GRIA4P48058 902 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 PSMD5Q16401 504 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 TRIM71Q2Q1W2 868 aaKnown RBP24.03■■□□□ 1.44
PABPN1-202ENST00000397276 BEND5Q7L4P6 421 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 SREK1Q8WXA9 508 aaKnown RBP24.03■■□□□ 1.44
PABPN1-202ENST00000397276 SERPINB11Q96P15 392 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 OR52B2Q96RD2 323 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 TMEM88BA6NKF7 163 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 CIB2O75838 187 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 CKBP12277 381 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 CD1EP15812 388 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 ARCN1P48444 511 aaKnown RBP24.03■■□□□ 1.44
PABPN1-202ENST00000397276 ALFQ53S48 1182 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 ZNF470Q6ECI4 717 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 NET1Q7Z628 596 aaPredicted RBP24.03■■□□□ 1.44
PABPN1-202ENST00000397276 NUP93Q8N1F7 819 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 TMEM151AQ8N4L1 468 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 NXNL1Q96CM4 212 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 STN1Q9H668 368 aaKnown RBP24.03■■□□□ 1.44
PABPN1-202ENST00000397276 NOL6Q9H6R4 1146 aaKnown RBP24.03■■□□□ 1.44
PABPN1-202ENST00000397276 TCAF1Q9Y4C2 921 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 FAM95CA0A1B0GW59 222 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 ATP5BP06576 529 aaKnown RBP24.03■■□□□ 1.44
PABPN1-202ENST00000397276 ADRA1AP35348 466 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 COPAP53621 1224 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 EPHB1P54762 984 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 MBTPS1Q14703 1052 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 LPCAT4Q643R3 524 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 CENPLQ8N0S6 344 aaPredicted RBP24.03■■□□□ 1.44
PABPN1-202ENST00000397276 EZH1Q92800 747 aaPredicted RBP24.03■■□□□ 1.44
PABPN1-202ENST00000397276 ELMO2Q96JJ3 720 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 NR1H4Q96RI1 486 aaPredicted RBP24.03■■□□□ 1.44
PABPN1-202ENST00000397276 SPATA16Q9BXB7 569 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 SORCS3Q9UPU3 1222 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 SLC27A5Q9Y2P5 690 aa24.03■■□□□ 1.44
PABPN1-202ENST00000397276 F8W8V4 182 aa24.02■■□□□ 1.44
PABPN1-202ENST00000397276 ZBTB14O43829 449 aa24.02■■□□□ 1.44
PABPN1-202ENST00000397276 TADA2AO75478 443 aa24.02■■□□□ 1.44
PABPN1-202ENST00000397276 RPLP2P05387 115 aaKnown RBP24.02■■□□□ 1.44
PABPN1-202ENST00000397276 HAPLN1P10915 354 aaPredicted RBP24.02■■□□□ 1.44
PABPN1-202ENST00000397276 WNT3AP56704 352 aa24.02■■□□□ 1.44
PABPN1-202ENST00000397276 GSTA3Q16772 222 aa24.02■■□□□ 1.44
PABPN1-202ENST00000397276 ISLR2Q6UXK2 745 aa24.02■■□□□ 1.44
PABPN1-202ENST00000397276 HMCESQ96FZ2 354 aa24.02■■□□□ 1.44
PABPN1-202ENST00000397276 ENTPD7Q9NQZ7 604 aa24.02■■□□□ 1.44
PABPN1-202ENST00000397276 RNF186Q9NXI6 227 aa24.02■■□□□ 1.44
PABPN1-202ENST00000397276 BUD23O43709 281 aaKnown RBP24.02■■□□□ 1.44
PABPN1-202ENST00000397276 TBX4P57082 545 aa24.02■■□□□ 1.44
PABPN1-202ENST00000397276 SLC12A1Q13621 1099 aa24.02■■□□□ 1.44
PABPN1-202ENST00000397276 MON1AQ86VX9 555 aa24.02■■□□□ 1.44
PABPN1-202ENST00000397276 CIR1Q86X95 450 aaPredicted RBP24.02■■□□□ 1.44
PABPN1-202ENST00000397276 B4GALNT2Q8NHY0 566 aa24.02■■□□□ 1.44
PABPN1-202ENST00000397276 NDNQ99608 321 aa24.02■■□□□ 1.44
PABPN1-202ENST00000397276 TBC1D13Q9NVG8 400 aa24.02■■□□□ 1.44
PABPN1-202ENST00000397276 XPR1Q9UBH6 696 aa24.02■■□□□ 1.44
PABPN1-202ENST00000397276 ACOT9Q9Y305 439 aa24.02■■□□□ 1.44
PABPN1-202ENST00000397276 A0A088AWK7 358 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 CCL22O00626 93 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 PDE5AO76074 875 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 AP2B1P63010 937 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 SLC10A7Q0GE19 358 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 ARL13AQ5H913 290 aaPredicted RBP24.01■■□□□ 1.43
PABPN1-202ENST00000397276 TIGD7Q6NT04 549 aaPredicted RBP24.01■■□□□ 1.43
PABPN1-202ENST00000397276 EPGNQ6UW88 154 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 RNF135Q8IUD6 432 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 LINC01599Q8WXQ3 324 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 FAM193BQ96PV7 902 aaPredicted RBP24.01■■□□□ 1.43
PABPN1-202ENST00000397276 ILKAPQ9H0C8 392 aaPredicted RBP24.01■■□□□ 1.43
PABPN1-202ENST00000397276 RGS18Q9NS28 235 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 NSMCE4AQ9NXX6 385 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 ARHGEF37A1IGU5 675 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 PYGLP06737 847 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 ALOX15P16050 662 aaPredicted RBP24.01■■□□□ 1.43
PABPN1-202ENST00000397276 EPHA3P29320 983 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 CRABP2P29373 138 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 CD86P42081 329 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 ZNF789Q5FWF6 425 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 C6orf163Q5TEZ5 329 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 RANBP10Q6VN20 620 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 SLC24A5Q71RS6 500 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 HIPK4Q8NE63 616 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 CCDC124Q96CT7 223 aaKnown RBP24.01■■□□□ 1.43
PABPN1-202ENST00000397276 IRAK4Q9NWZ3 460 aa24.01■■□□□ 1.43
PABPN1-202ENST00000397276 PIGNO95427 931 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 STMN1P16949 149 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 ETFBP38117 255 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 GRIA2P42262 883 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 DLG1Q12959 904 aa24■■□□□ 1.43
PABPN1-202ENST00000397276 TRMT5Q32P41 509 aaKnown RBP24■■□□□ 1.43
PABPN1-202ENST00000397276 LIN52Q52LA3 116 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms