RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 NPR3P17342 541 aa7.26□□□□□ -1.25
UPF2-203ENST00000397053 GSTM5P46439 218 aa7.26□□□□□ -1.25
UPF2-203ENST00000397053 HK2P52789 917 aa7.26□□□□□ -1.25
UPF2-203ENST00000397053 CDC42P60953 191 aa7.26□□□□□ -1.25
UPF2-203ENST00000397053 CBX2Q14781 532 aaPredicted RBP7.26□□□□□ -1.25
UPF2-203ENST00000397053 NAA30Q147X3 362 aaPredicted RBP7.26□□□□□ -1.25
UPF2-203ENST00000397053 CHSY3Q70JA7 882 aa7.26□□□□□ -1.25
UPF2-203ENST00000397053 FBXO25Q8TCJ0 367 aa7.26□□□□□ -1.25
UPF2-203ENST00000397053 EPS8L3Q8TE67 593 aaKnown RBP7.26□□□□□ -1.25
UPF2-203ENST00000397053 PPP1R13LQ8WUF5 828 aa7.26□□□□□ -1.25
UPF2-203ENST00000397053 SNRNP27Q8WVK2 155 aaKnown RBP7.26□□□□□ -1.25
UPF2-203ENST00000397053 QKIQ96PU8 341 aaKnown RBP eCLIP7.26□□□□□ -1.252e-13■■■■■ 45.4
UPF2-203ENST00000397053 TCF25Q9BQ70 676 aa7.26□□□□□ -1.25
UPF2-203ENST00000397053 TTPALQ9BTX7 342 aa7.26□□□□□ -1.25
UPF2-203ENST00000397053 PDCD10Q9BUL8 212 aa7.26□□□□□ -1.25
UPF2-203ENST00000397053 ADAM7Q9H2U9 754 aa7.26□□□□□ -1.25
UPF2-203ENST00000397053 CAB39LQ9H9S4 337 aa7.26□□□□□ -1.25
UPF2-203ENST00000397053 EXD2Q9NVH0 621 aa7.26□□□□□ -1.25
UPF2-203ENST00000397053 NDUFA13Q9P0J0 144 aa7.26□□□□□ -1.25
UPF2-203ENST00000397053 GPC6Q9Y625 555 aaPredicted RBP7.26□□□□□ -1.25
UPF2-203ENST00000397053 CNTRLQ7Z7A1 2325 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 UBE2QL1A1L167 161 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 TRIM3O75382 744 aaPredicted RBP7.25□□□□□ -1.25
UPF2-203ENST00000397053 CDK14O94921 469 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 CCNDBP1O95273 360 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 DBIP07108 87 aaKnown RBP7.25□□□□□ -1.25
UPF2-203ENST00000397053 BUD31P41223 144 aaPredicted RBP7.25□□□□□ -1.25
UPF2-203ENST00000397053 GPD2P43304 727 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 BMT2Q1RMZ1 405 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 AKIRIN2Q53H80 203 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.25□□□□□ -1.25
UPF2-203ENST00000397053 LRRC34Q8IZ02 419 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 PHC3Q8NDX5 983 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 CPNE1Q99829 537 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 TMEM79Q9BSE2 394 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 BPIFA1Q9NP55 256 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 PCDH12Q9NPG4 1184 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 RASSF1Q9NS23 344 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 PLK2Q9NYY3 685 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 OR6C75A6NL08 312 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 PHGDHO43175 533 aaKnown RBP7.25□□□□□ -1.25
UPF2-203ENST00000397053 SMIM10L2AP0DMW4 78 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 SMIM10L2BP0DMW5 78 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 FRG1Q14331 258 aaKnown RBP7.25□□□□□ -1.25
UPF2-203ENST00000397053 Q4G0T1 1027 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 MPPE1Q53F39 396 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 C9orf64Q5T6V5 341 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 PRSS58Q8IYP2 241 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 CDC42EP4Q9H3Q1 356 aaKnown RBP7.25□□□□□ -1.25
UPF2-203ENST00000397053 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.25□□□□□ -1.25
UPF2-203ENST00000397053 ING3Q9NXR8 418 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 HAO1Q9UJM8 370 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 ST3GAL5Q9UNP4 418 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 ADGRA3Q8IWK6 1321 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 F8VZ95 297 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 WRBO00258 174 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 GRM6O15303 877 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 PDE5AO76074 875 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 HSD17B3P37058 310 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 KCNJ5P48544 419 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 SLC7A2P52569 658 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 NRG3P56975 720 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 USP46P62068 366 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 SP2Q02086 613 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 INAVAQ3KP66 663 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 LSM12Q3MHD2 195 aaKnown RBP7.25□□□□□ -1.25
UPF2-203ENST00000397053 KLHL12Q53G59 568 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 WDR59Q6PJI9 974 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 MCOLN2Q8IZK6 566 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 RNF148Q8N7C7 305 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 PHF10Q8WUB8 498 aaKnown RBP7.25□□□□□ -1.25
UPF2-203ENST00000397053 TIFAQ96CG3 184 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 HSFY1Q96LI6 401 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 TAPBPLQ9BX59 468 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 BRINP2Q9C0B6 783 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 NUAK2Q9H093 628 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 ALG9Q9H6U8 611 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 KIAA1522Q9P206 1035 aaPredicted RBP7.25□□□□□ -1.25
UPF2-203ENST00000397053 CFAP97Q9P2B7 532 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 MBD2Q9UBB5 411 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 ERVW-1Q9UQF0 538 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 ZNF510Q9Y2H8 683 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 ENO4A6NNW6 628 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 IDH3BO43837 385 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 CYB5AP00167 134 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 CALB2P22676 271 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 ATP5F1P24539 256 aaPredicted RBP7.25□□□□□ -1.25
UPF2-203ENST00000397053 MIPP30301 263 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 FKBP1BP68106 108 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 PTGES3Q15185 160 aaKnown RBP7.25□□□□□ -1.25
UPF2-203ENST00000397053 ZMYND11Q15326 602 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 CPSF6Q16630 551 aaKnown RBP eCLIP7.25□□□□□ -1.251e-6■■□□□ 14.4
UPF2-203ENST00000397053 UAP1L1Q3KQV9 507 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 FAM91A1Q658Y4 838 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 DCLRE1AQ6PJP8 1040 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 LRRC49Q8IUZ0 686 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 OFCC1Q8IZS5 231 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 TERB1Q8NA31 727 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 SPPL2BQ8TCT7 592 aa7.25□□□□□ -1.25
UPF2-203ENST00000397053 HCAR2Q8TDS4 363 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms