RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 WASH3PC4AMC7 463 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 TOP3BO95985 862 aaKnown RBP17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 SPINK2P20155 84 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 L1CAMP32004 1257 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 ADRA1BP35368 520 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 ARL4AP40617 200 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 GDF10P55107 478 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 EFEMP1Q12805 493 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 MTA1Q13330 715 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 EFHC2Q5JST6 749 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 BRMS1LQ5PSV4 323 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 PCGF5Q86SE9 256 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 FAM131BQ86XD5 332 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 PLD5Q8N7P1 536 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 PCDH19Q8TAB3 1148 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 DQX1Q8TE96 717 aaKnown RBP17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 P3H4Q92791 437 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 SERPINB11Q96P15 392 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 ROPN1BQ9BZX4 212 aaPredicted RBP17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 PHACTR1Q9C0D0 580 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 SLC32A1Q9H598 525 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 ROPN1Q9HAT0 212 aaPredicted RBP17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 NINJ2Q9NZG7 142 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 FARP1Q9Y4F1 1045 aaPredicted RBP17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 FREM2Q5SZK8 3169 aa17.8■□□□□ 0.44
TNFSF13-205ENST00000396545 APOL1O14791 398 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 RBP3P10745 1247 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 CORO1AP31146 461 aaKnown RBP17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 STIP1P31948 543 aaKnown RBP17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 NME3Q13232 169 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 EIF4EBP2Q13542 120 aaPredicted RBP17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 ENPP2Q13822 863 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 TNFAIP8L3Q5GJ75 292 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 NPNTQ6UXI9 565 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 UNC45BQ8IWX7 931 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 ARFGAP2Q8N6H7 521 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 EDEM1Q92611 657 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 ZNF419Q96HQ0 510 aaPredicted RBP17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 PWWP2AQ96N64 755 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 GTPBP2Q9BX10 602 aaKnown RBP17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 CAPS2Q9BXY5 557 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 DHX35Q9H5Z1 703 aaKnown RBP17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 WDCPQ9H6R7 721 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 PIGVQ9NUD9 493 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 AGO1Q9UL18 857 aaKnown RBP17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 STON1Q9Y6Q2 735 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 ADAMTS9Q9P2N4 1935 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 ZFYVE26Q68DK2 2539 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 H3BRJ5 948 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 SLC2A3P11169 496 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 HTR7P34969 479 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 RPL22P35268 128 aaKnown RBP17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 HCAR3P49019 387 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 ATXN3P54252 364 aaPredicted RBP17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 GEN1Q17RS7 908 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 FUT11Q495W5 492 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 C6orf118Q5T5N4 469 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 ACBD5Q5T8D3 534 aaPredicted RBP17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 CCDC185Q8N715 623 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 PRCCQ92733 491 aaPredicted RBP17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 RTP4Q96DX8 246 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 SCNM1Q9BWG6 230 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 MARCH2Q9P0N8 246 aa17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 THAP10Q9P2Z0 257 aaPredicted RBP17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 NOVA2Q9UNW9 492 aaKnown RBP17.79■□□□□ 0.44
TNFSF13-205ENST00000396545 PKD1L2Q7Z442 2459 aa17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 SMAPO00193 183 aa17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 ARHGAP33O14559 1287 aa17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 NPC1O15118 1278 aa17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 IRAK2O43187 625 aa17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 TCEA3O75764 348 aa17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 ZNF189O75820 626 aaPredicted RBP17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 IFNB1P01574 187 aa17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 HMBSP08397 361 aa17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 PITX1P78337 314 aaPredicted RBP17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 STARD3Q14849 445 aa17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 KIAA1324Q6UXG2 1013 aaKnown RBP17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 BZW1Q7L1Q6 419 aaKnown RBP17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 METTL3Q86U44 580 aaKnown RBP17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 TAC4Q86UU9 113 aa17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 DENND1CQ8IV53 801 aa17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 HDDC3Q8N4P3 179 aa17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 MINDY1Q8N5J2 469 aa17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 KDF1Q8NAX2 398 aaPredicted RBP17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 GATA6Q92908 595 aa17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 KCTD15Q96SI1 283 aaPredicted RBP17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 MKRN2Q9H000 416 aaKnown RBP17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 CENPHQ9H3R5 247 aa17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 C10orf88Q9H8K7 445 aa17.78■□□□□ 0.44
TNFSF13-205ENST00000396545 DSPP15924 2871 aaKnown RBP17.77■□□□□ 0.44
TNFSF13-205ENST00000396545 CFAP69A5D8W1 941 aa17.77■□□□□ 0.44
TNFSF13-205ENST00000396545 OPHN1O60890 802 aa17.77■□□□□ 0.44
TNFSF13-205ENST00000396545 ABHD2P08910 425 aa17.77■□□□□ 0.44
TNFSF13-205ENST00000396545 CCR1P32246 355 aa17.77■□□□□ 0.44
TNFSF13-205ENST00000396545 ACTN2P35609 894 aa17.77■□□□□ 0.44
TNFSF13-205ENST00000396545 IL12RB1P42701 662 aa17.77■□□□□ 0.44
TNFSF13-205ENST00000396545 NR2C2P49116 596 aa17.77■□□□□ 0.44
TNFSF13-205ENST00000396545 IRAK1P51617 712 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms