RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 SMAD1Q15797 465 aaKnown RBP18.57■□□□□ 0.56
FXN-203ENST00000396366 KIAA1161Q6NSJ0 714 aa18.57■□□□□ 0.56
FXN-203ENST00000396366 GDPD4Q6W3E5 623 aa18.57■□□□□ 0.56
FXN-203ENST00000396366 ABI3BPQ7Z7G0 1075 aa18.57■□□□□ 0.56
FXN-203ENST00000396366 LUZP1Q86V48 1076 aa18.57■□□□□ 0.56
FXN-203ENST00000396366 UMODL1-AS1Q8N2C9 162 aa18.57■□□□□ 0.56
FXN-203ENST00000396366 TSC1Q92574 1164 aa18.57■□□□□ 0.56
FXN-203ENST00000396366 LRIG1Q96JA1 1093 aa18.57■□□□□ 0.56
FXN-203ENST00000396366 EXOC2Q96KP1 924 aa18.57■□□□□ 0.56
FXN-203ENST00000396366 DHX35Q9H5Z1 703 aaKnown RBP18.57■□□□□ 0.56
FXN-203ENST00000396366 CATSPERBQ9H7T0 1116 aa18.57■□□□□ 0.56
FXN-203ENST00000396366 KLHL11Q9NVR0 708 aa18.57■□□□□ 0.56
FXN-203ENST00000396366 CNOT8Q9UFF9 292 aaKnown RBP18.57■□□□□ 0.56
FXN-203ENST00000396366 AP4E1Q9UPM8 1137 aa18.57■□□□□ 0.56
FXN-203ENST00000396366 DGKAP23743 735 aa18.56■□□□□ 0.56
FXN-203ENST00000396366 ACADVLP49748 655 aa18.56■□□□□ 0.56
FXN-203ENST00000396366 RHOAP61586 193 aa18.56■□□□□ 0.56
FXN-203ENST00000396366 KLHL30Q0D2K2 578 aa18.56■□□□□ 0.56
FXN-203ENST00000396366 CAMK2BQ13554 666 aa18.56■□□□□ 0.56
FXN-203ENST00000396366 PARP15Q460N3 678 aa18.56■□□□□ 0.56
FXN-203ENST00000396366 INO80DQ53TQ3 878 aaPredicted RBP18.56■□□□□ 0.56
FXN-203ENST00000396366 TPRG1LQ5T0D9 272 aa18.56■□□□□ 0.56
FXN-203ENST00000396366 CYP4V2Q6ZWL3 525 aaPredicted RBP18.56■□□□□ 0.56
FXN-203ENST00000396366 PTAR1Q7Z6K3 402 aaPredicted RBP18.56■□□□□ 0.56
FXN-203ENST00000396366 TTC7BQ86TV6 843 aa18.56■□□□□ 0.56
FXN-203ENST00000396366 GDAP1L1Q96MZ0 367 aa18.56■□□□□ 0.56
FXN-203ENST00000396366 KCTD15Q96SI1 283 aaPredicted RBP18.56■□□□□ 0.56
FXN-203ENST00000396366 KLF6Q99612 283 aaPredicted RBP18.56■□□□□ 0.56
FXN-203ENST00000396366 SNRNP25Q9BV90 132 aaKnown RBP18.56■□□□□ 0.56
FXN-203ENST00000396366 C1QTNF2Q9BXJ5 285 aa18.56■□□□□ 0.56
FXN-203ENST00000396366 SLC39A8Q9C0K1 460 aa18.56■□□□□ 0.56
FXN-203ENST00000396366 LRRC19Q9H756 370 aa18.56■□□□□ 0.56
FXN-203ENST00000396366 MYO1AQ9UBC5 1043 aa18.56■□□□□ 0.56
FXN-203ENST00000396366 LHX3Q9UBR4 397 aa18.56■□□□□ 0.56
FXN-203ENST00000396366 HS3ST3A1Q9Y663 406 aa18.56■□□□□ 0.56
FXN-203ENST00000396366 NBEAQ8NFP9 2946 aa18.56■□□□□ 0.56
FXN-203ENST00000396366 ITPR1Q14643 2758 aa18.55■□□□□ 0.56
FXN-203ENST00000396366 TRABD2BA6NFA1 517 aa18.55■□□□□ 0.56
FXN-203ENST00000396366 ZSCAN5CA6NGD5 496 aaPredicted RBP18.55■□□□□ 0.56
FXN-203ENST00000396366 NEMP1O14524 444 aa18.55■□□□□ 0.56
FXN-203ENST00000396366 FGF10O15520 208 aaPredicted RBP18.55■□□□□ 0.56
FXN-203ENST00000396366 TSPAN6O43657 245 aa18.55■□□□□ 0.56
FXN-203ENST00000396366 SIGLEC6O43699 453 aa18.55■□□□□ 0.56
FXN-203ENST00000396366 RFPL3O75679 317 aa18.55■□□□□ 0.56
FXN-203ENST00000396366 GZMAP12544 262 aa18.55■□□□□ 0.56
FXN-203ENST00000396366 MIPP30301 263 aa18.55■□□□□ 0.56
FXN-203ENST00000396366 ERMARDQ5T6L9 678 aa18.55■□□□□ 0.56
FXN-203ENST00000396366 PROSER1Q86XN7 944 aa18.55■□□□□ 0.56
FXN-203ENST00000396366 GALNT15Q8N3T1 639 aa18.55■□□□□ 0.56
FXN-203ENST00000396366 ZNF653Q96CK0 615 aa18.55■□□□□ 0.56
FXN-203ENST00000396366 CCDC86Q9H6F5 360 aaKnown RBP18.55■□□□□ 0.56
FXN-203ENST00000396366 PDFQ9HBH1 243 aa18.55■□□□□ 0.56
FXN-203ENST00000396366 CELSR3Q9NYQ7 3312 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 A6NNZ2 444 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 EEF2KO00418 725 aaKnown RBP18.54■□□□□ 0.56
FXN-203ENST00000396366 AREL1O15033 823 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 FFAR2O15552 330 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 MMP20O60882 483 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 IGSF6O95976 241 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 GIMD1P0DJR0 217 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 MYF5P13349 255 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 TIMP2P16035 220 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 PAPOLAP51003 745 aaKnown RBP18.54■□□□□ 0.56
FXN-203ENST00000396366 FANCCQ00597 558 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 SGCGQ13326 291 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 FZD2Q14332 565 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 PROX2Q3B8N5 592 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 PPP1R2P3Q6NXS1 205 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 CASKIN2Q8WXE0 1202 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 RAB7BQ96AH8 199 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 OSBPL1AQ9BXW6 950 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 EDEM3Q9BZQ6 932 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 GPR27Q9NS67 375 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 PCDHGA1Q9Y5H4 931 aa18.54■□□□□ 0.56
FXN-203ENST00000396366 BUB1BO60566 1050 aaPredicted RBP18.53■□□□□ 0.56
FXN-203ENST00000396366 PIAS2O75928 621 aa18.53■□□□□ 0.56
FXN-203ENST00000396366 RNF8O76064 485 aa18.53■□□□□ 0.56
FXN-203ENST00000396366 PIGNO95427 931 aa18.53■□□□□ 0.56
FXN-203ENST00000396366 TCF4P15884 667 aa18.53■□□□□ 0.56
FXN-203ENST00000396366 CKMT2P17540 419 aa18.53■□□□□ 0.56
FXN-203ENST00000396366 DESP17661 470 aa18.53■□□□□ 0.56
FXN-203ENST00000396366 PBX1P40424 430 aa18.53■□□□□ 0.56
FXN-203ENST00000396366 CYP4F3Q08477 520 aa18.53■□□□□ 0.56
FXN-203ENST00000396366 PPP6R3Q5H9R7 873 aaPredicted RBP18.53■□□□□ 0.56
FXN-203ENST00000396366 HGSNATQ68CP4 663 aa18.53■□□□□ 0.56
FXN-203ENST00000396366 ARHGAP36Q6ZRI8 547 aa18.53■□□□□ 0.56
FXN-203ENST00000396366 RFX8Q6ZV50 586 aa18.53■□□□□ 0.56
FXN-203ENST00000396366 TP53INP2Q8IXH6 220 aa18.53■□□□□ 0.56
FXN-203ENST00000396366 CPLX3Q8WVH0 158 aa18.53■□□□□ 0.56
FXN-203ENST00000396366 LENG8Q96PV6 779 aaPredicted RBP18.53■□□□□ 0.56
FXN-203ENST00000396366 WRAP53Q9BUR4 548 aaKnown RBP18.53■□□□□ 0.56
FXN-203ENST00000396366 ISCUQ9H1K1 167 aa18.53■□□□□ 0.56
FXN-203ENST00000396366 DNAJC28Q9NX36 388 aa18.53■□□□□ 0.56
FXN-203ENST00000396366 UBA2Q9UBT2 640 aaPredicted RBP18.53■□□□□ 0.56
FXN-203ENST00000396366 KLF15Q9UIH9 416 aa18.53■□□□□ 0.56
FXN-203ENST00000396366 MFHAS1Q9Y4C4 1052 aa18.53■□□□□ 0.56
FXN-203ENST00000396366 ZFYVE26Q68DK2 2539 aa18.53■□□□□ 0.56
FXN-203ENST00000396366 KNTC1P50748 2209 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 FPGTO14772 594 aa18.52■□□□□ 0.56
FXN-203ENST00000396366 DAPK3O43293 454 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms