RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ATAT1Q5SQI0 421 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 GLT6D1Q7Z4J2 308 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 TCAIMQ8N3R3 496 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 NAT8LQ8N9F0 302 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 PLEKHO2Q8TD55 490 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 PRCCQ92733 491 aaPredicted RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 NSL1Q96IY1 281 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 SDCBP2Q9H190 292 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 NT5MQ9NPB1 228 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 NINJ2Q9NZG7 142 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 TIMM13Q9Y5L4 95 aaPredicted RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 DNAJA2O60884 412 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 SASH3O75995 380 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 CATP04040 527 aaKnown RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 GSTM1P09488 218 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 ELNP15502 786 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 CRHR1P34998 444 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 SATB1Q01826 763 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 GSTM4Q03013 218 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 LIPMQ5VYY2 423 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 ANKS6Q68DC2 871 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 AFTPHQ6ULP2 937 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 TMEM135Q86UB9 458 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 ANKMY2Q8IV38 441 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 LINC01465Q8N7H1 131 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 KIAA1958Q8N8K9 716 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 COPS8Q99627 209 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 TBL1YQ9BQ87 522 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 KLC4Q9NSK0 619 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 GNPTGQ9UJJ9 305 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 A0A1W2PQ45 241 aaPredicted RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 A0A1W2PQY0 241 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 ZBTB14O43829 449 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 MAGEA6P43360 314 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 LIMK2P53671 638 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 TGM3Q08188 693 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 EPS8Q12929 822 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 KPNB1Q14974 876 aaKnown RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 C1orf220Q5T0J3 134 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 ZNF618Q5T7W0 954 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 TTC19Q6DKK2 380 aaPredicted RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 GDF6Q6KF10 455 aaPredicted RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 DEFB128Q7Z7B8 93 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 RAVER1Q8IY67 606 aaKnown RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 TRIML2Q8N7C3 387 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 DNAJB8Q8NHS0 232 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 EPS8L3Q8TE67 593 aaKnown RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 CASP10Q92851 521 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 SEMA3CQ99985 751 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 MSRAQ9UJ68 235 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 GJD2Q9UKL4 321 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 GUCY1B2O75343 617 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 SYF2O95926 243 aaKnown RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 FGBP02675 491 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 POLR2EP19388 210 aaKnown RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 NFKB1P19838 968 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 PTGER3P43115 390 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 CORO7P57737 925 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 GBE1Q04446 702 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 PKN3Q6P5Z2 889 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 PHOSPHO2Q8TCD6 241 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 FEM1CQ96JP0 617 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 RBBP8Q99708 897 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 SCOCQ9UIL1 159 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 TEX264Q9Y6I9 313 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 E9PAM4 449 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 C1QTNF3-AMACRE9PGA6 284 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 GRM6O15303 877 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 UNC5CO95185 931 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 FTH1P02794 183 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 PRNPP04156 253 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 FPGSQ05932 587 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 CHST9Q7L1S5 443 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 TAB3Q8N5C8 712 aaPredicted RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 SLC25A23Q9BV35 468 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 AGO3Q9H9G7 860 aaKnown RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 ZFYVE1Q9HBF4 777 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 GLOD4Q9HC38 313 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 NPHS2Q9NP85 383 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 NDFIP2Q9NV92 336 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 VWA7Q9Y334 891 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 MFHAS1Q9Y4C4 1052 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 A0A088AWK7 358 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 ZNF10P21506 573 aaPredicted RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 NKX3-2P78367 333 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 NSUN2Q08J23 767 aaKnown RBP eCLIP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 SYTL3Q4VX76 610 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 ZBTB41Q5SVQ8 909 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 SLC8B1Q6J4K2 584 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 TAS2R42Q7RTR8 314 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 DNAAF5Q86Y56 855 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 LRRC15Q8TF66 581 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 HASPINQ8TF76 798 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 CPT1BQ92523 772 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 ARL8AQ96BM9 186 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 TRMT2BQ96GJ1 504 aaKnown RBP3.42□□□□□ -1.86
VPS13C-203ENST00000395896 LGMNQ99538 433 aa3.42□□□□□ -1.86
VPS13C-203ENST00000395896 ERVK-5Q9HDB9 667 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms