RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 CYP2U1Q7Z449 544 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 SRLQ86TD4 932 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 RBM41Q96IZ5 413 aaKnown RBP16.77■□□□□ 0.28
CXCL1-201ENST00000395761 LRIG1Q96JA1 1093 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 KLHL32Q96NJ5 620 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 ALS2CR12Q96Q35 445 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 HDAC8Q9BY41 377 aa16.77■□□□□ 0.28
CXCL1-201ENST00000395761 RIF1Q5UIP0 2472 aaKnown RBP16.77■□□□□ 0.27
CXCL1-201ENST00000395761 TBC1D3DA0A087WVF3 549 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 TBC1D3IA0A087WXS9 549 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 TBC1D3EA0A087X179 549 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 TBC1D3KA0A087X1G2 549 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 TBC1D3FA6NER0 549 aaPredicted RBP16.76■□□□□ 0.27
CXCL1-201ENST00000395761 MEI4A8MW99 385 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 TBC1D3LB9A6J9 549 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 MATN3O15232 486 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 DDX3YO15523 660 aaKnown RBP16.76■□□□□ 0.27
CXCL1-201ENST00000395761 PLRG1O43660 514 aaKnown RBP16.76■□□□□ 0.27
CXCL1-201ENST00000395761 FSBPO95073 299 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 IGHV4-34P06331 123 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 TBC1D3HP0C7X1 549 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 PECAM1P16284 738 aaPredicted RBP16.76■□□□□ 0.27
CXCL1-201ENST00000395761 ITGB7P26010 798 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 MPLP40238 635 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 MMP13P45452 471 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 CSNK1DP48730 415 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 SCNN1BP51168 640 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 MAXP61244 160 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 RAD51Q06609 339 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 NSUN2Q08J23 767 aaKnown RBP eCLIP16.76■□□□□ 0.27
CXCL1-201ENST00000395761 ZNF235Q14590 738 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 ZNF805Q5CZA5 627 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 PLA2G2CQ5R387 149 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 TBC1D3GQ6DHY5 549 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 TBC1D3CQ6IPX1 549 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 CAMK1DQ8IU85 385 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 SYT12Q8IV01 421 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 TBC1D3Q8IZP1 549 aaPredicted RBP16.76■□□□□ 0.27
CXCL1-201ENST00000395761 TEX26Q8N6G2 289 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 CCNYQ8ND76 341 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 OR2T34Q8NGX1 318 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 NSMCE1Q8WV22 266 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 MAML1Q92585 1016 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 FOXJ1Q92949 421 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 BIRC7Q96CA5 298 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 HDAC11Q96DB2 347 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 PPP1R16AQ96I34 528 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 OLFM3Q96PB7 478 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 CPEB1Q9BZB8 566 aaKnown RBP16.76■□□□□ 0.27
CXCL1-201ENST00000395761 DYRK4Q9NR20 520 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 PILRBQ9UKJ0 227 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.76■□□□□ 0.27
CXCL1-201ENST00000395761 PCDHGA5Q9Y5G8 931 aa16.76■□□□□ 0.27
CXCL1-201ENST00000395761 LRRC72A6NJI9 287 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 C16orf96A6NNT2 1141 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 PATE3B3GLJ2 98 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 C10orf142B7Z368 130 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 SLC7A4O43246 635 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 TUBB4AP04350 444 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 CR2P20023 1033 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 MSNP26038 577 aaKnown RBP16.75■□□□□ 0.27
CXCL1-201ENST00000395761 HOXD11P31277 338 aaPredicted RBP16.75■□□□□ 0.27
CXCL1-201ENST00000395761 RENBPP51606 427 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 COPS2P61201 443 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 PPIDQ08752 370 aaKnown RBP16.75■□□□□ 0.27
CXCL1-201ENST00000395761 ZNF211Q13398 564 aaPredicted RBP16.75■□□□□ 0.27
CXCL1-201ENST00000395761 HNRNPDQ14103 355 aaKnown RBP16.75■□□□□ 0.27
CXCL1-201ENST00000395761 PDK1Q15118 436 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 PPP2R5EQ16537 467 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 ZNF569Q5MCW4 686 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 KIAA0895LQ68EN5 471 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 NYAP1Q6ZVC0 841 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 PARS2Q7L3T8 475 aaKnown RBP16.75■□□□□ 0.27
CXCL1-201ENST00000395761 CCDC13Q8IYE1 715 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 RGL4Q8IZJ4 473 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 DNASE2BQ8WZ79 361 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 HAUS1Q96CS2 278 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 HES6Q96HZ4 224 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 OSBPL1AQ9BXW6 950 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 PCED1AQ9H1Q7 454 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 NT5MQ9NPB1 228 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 SEMA4GQ9NTN9 838 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 EIF2B4Q9UI10 523 aaKnown RBP16.75■□□□□ 0.27
CXCL1-201ENST00000395761 SLCO1B1Q9Y6L6 691 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 PIEZO1Q92508 2521 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 ZNF292O60281 2723 aa16.75■□□□□ 0.27
CXCL1-201ENST00000395761 GON4LQ3T8J9 2241 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 CEP192Q8TEP8 1941 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 MIF4GDA9UHW6 222 aaKnown RBP16.74■□□□□ 0.27
CXCL1-201ENST00000395761 KCNK1O00180 336 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 JCHAINP01591 159 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 ADRB3P13945 408 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 CCNB1P14635 433 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 ITIH2P19823 946 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 TGM2P21980 687 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 ABL2P42684 1182 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 NR2C2P49116 596 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 NEK3P51956 506 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 PPP2CBP62714 309 aa16.74■□□□□ 0.27
CXCL1-201ENST00000395761 PPP2CAP67775 309 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms