RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 ERN2Q76MJ5 926 aaKnown RBP20.17■□□□□ 0.82
SNCA-203ENST00000394986 CCDC13Q8IYE1 715 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 SNX19Q92543 992 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 MAML1Q92585 1016 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 OSBPL8Q9BZF1 889 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 TMEM74BQ9NUR3 256 aa20.17■□□□□ 0.82
SNCA-203ENST00000394986 NUMA1Q14980 2115 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 C16orf96A6NNT2 1141 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 METTL12A8MUP2 240 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 FSBPO95073 299 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 TGM2P21980 687 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 MPLP40238 635 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 COPS2P61201 443 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 PPP2CBP62714 309 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 PPP2CAP67775 309 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 PPIDQ08752 370 aaKnown RBP20.16■□□□□ 0.82
SNCA-203ENST00000394986 AP1B1Q10567 949 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 PDK1Q15118 436 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 ZNF805Q5CZA5 627 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 TIGD7Q6NT04 549 aaPredicted RBP20.16■□□□□ 0.82
SNCA-203ENST00000394986 BBS12Q6ZW61 710 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 CAMK1DQ8IU85 385 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.16■□□□□ 0.82
SNCA-203ENST00000394986 TEX26Q8N6G2 289 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 CADM4Q8NFZ8 388 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 FOXJ1Q92949 421 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 LRIG1Q96JA1 1093 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 ALS2CR12Q96Q35 445 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 MGME1Q9BQP7 344 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 OSBPL1AQ9BXW6 950 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 HDAC8Q9BY41 377 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 CEP41Q9BYV8 373 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 PARD6AQ9NPB6 346 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.16■□□□□ 0.82
SNCA-203ENST00000394986 SLCO1B1Q9Y6L6 691 aa20.16■□□□□ 0.82
SNCA-203ENST00000394986 LRRC72A6NJI9 287 aa20.15■□□□□ 0.82
SNCA-203ENST00000394986 SLC7A4O43246 635 aa20.15■□□□□ 0.82
SNCA-203ENST00000394986 PLRG1O43660 514 aaKnown RBP20.15■□□□□ 0.82
SNCA-203ENST00000394986 ADRB3P13945 408 aa20.15■□□□□ 0.82
SNCA-203ENST00000394986 ABL2P42684 1182 aa20.15■□□□□ 0.82
SNCA-203ENST00000394986 CSNK1DP48730 415 aa20.15■□□□□ 0.82
SNCA-203ENST00000394986 RENBPP51606 427 aa20.15■□□□□ 0.82
SNCA-203ENST00000394986 NEK3P51956 506 aa20.15■□□□□ 0.82
SNCA-203ENST00000394986 ZBTB17Q13105 803 aa20.15■□□□□ 0.82
SNCA-203ENST00000394986 HNRNPDQ14103 355 aaKnown RBP20.15■□□□□ 0.82
SNCA-203ENST00000394986 RGL4Q8IZJ4 473 aa20.15■□□□□ 0.82
SNCA-203ENST00000394986 BBS5Q8N3I7 341 aa20.15■□□□□ 0.82
SNCA-203ENST00000394986 OR2T34Q8NGX1 318 aa20.15■□□□□ 0.82
SNCA-203ENST00000394986 BIRC7Q96CA5 298 aa20.15■□□□□ 0.82
SNCA-203ENST00000394986 CPEB1Q9BZB8 566 aaKnown RBP20.15■□□□□ 0.82
SNCA-203ENST00000394986 RBM22Q9NW64 420 aaKnown RBP eCLIP20.15■□□□□ 0.82
SNCA-203ENST00000394986 ITM2BQ9Y287 266 aa20.15■□□□□ 0.82
SNCA-203ENST00000394986 TTLL3Q9Y4R7 772 aa20.15■□□□□ 0.82
SNCA-203ENST00000394986 THADAQ6YHU6 1953 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 TBC1D3DA0A087WVF3 549 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 TBC1D3IA0A087WXS9 549 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 TBC1D3EA0A087X179 549 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 TBC1D3KA0A087X1G2 549 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 TBC1D3FA6NER0 549 aaPredicted RBP20.14■□□□□ 0.81
SNCA-203ENST00000394986 PATE3B3GLJ2 98 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 TBC1D3LB9A6J9 549 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 PPP1R12AO14974 1030 aaPredicted RBP20.14■□□□□ 0.81
SNCA-203ENST00000394986 JCHAINP01591 159 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 HLA-DQB2P05538 268 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 IGHV4-34P06331 123 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 TBC1D3HP0C7X1 549 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 CCNB1P14635 433 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 CR2P20023 1033 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 PTPN7P35236 360 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 ITKQ08881 620 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 NSUN2Q08J23 767 aaKnown RBP eCLIP20.14■□□□□ 0.81
SNCA-203ENST00000394986 CCDC173Q0VFZ6 552 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 MEI1Q5TIA1 1274 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 KIAA0895LQ68EN5 471 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 TBC1D3GQ6DHY5 549 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 TBC1D3CQ6IPX1 549 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 TCEAL6Q6IPX3 200 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 FBXL19Q6PCT2 694 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 ZC3H18Q86VM9 953 aaKnown RBP20.14■□□□□ 0.81
SNCA-203ENST00000394986 REXO1L1PQ8IX06 675 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 TBC1D3Q8IZP1 549 aaPredicted RBP20.14■□□□□ 0.81
SNCA-203ENST00000394986 P3H4Q92791 437 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 TCEAL3Q969E4 200 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 FAM118BQ9BPY3 351 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 MIR1-1HGQ9H1L0 117 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 SUV39H2Q9H5I1 410 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 NOD2Q9HC29 1040 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 TRMT1Q9NXH9 659 aaKnown RBP20.14■□□□□ 0.81
SNCA-203ENST00000394986 SEPT10Q9P0V9 454 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 EIF2B4Q9UI10 523 aaKnown RBP20.14■□□□□ 0.81
SNCA-203ENST00000394986 GGT7Q9UJ14 662 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 PILRBQ9UKJ0 227 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 PYCARDQ9ULZ3 195 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 PCDHGA5Q9Y5G8 931 aa20.14■□□□□ 0.81
SNCA-203ENST00000394986 EP300Q09472 2414 aaPredicted RBP20.14■□□□□ 0.81
SNCA-203ENST00000394986 SPAG17Q6Q759 2223 aa20.13■□□□□ 0.81
SNCA-203ENST00000394986 SPINT1O43278 529 aa20.13■□□□□ 0.81
SNCA-203ENST00000394986 ITIH2P19823 946 aa20.13■□□□□ 0.81
SNCA-203ENST00000394986 HSPA9P38646 679 aaKnown RBP20.13■□□□□ 0.81
SNCA-203ENST00000394986 NR2C2P49116 596 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms