RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 AMIGO1Q86WK6 493 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 IFNL1Q8IU54 200 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 C12orf56Q8IXR9 622 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 UNC5BQ8IZJ1 945 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 TRPM4Q8TD43 1214 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 RSAD2Q8WXG1 361 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 ST6GAL2Q96JF0 529 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 MUS81Q96NY9 551 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 NAP1L4Q99733 375 aaKnown RBP12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 TMEM47Q9BQJ4 181 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 DNAI2Q9GZS0 605 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 ING2Q9H160 280 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 ERVMER34-1Q9H9K5 563 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 FBXO40Q9UH90 709 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 ABCB7O75027 752 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 ZNF250P15622 560 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 FGFR2P21802 821 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 SLC7A1P30825 629 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 NUDT1P36639 197 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 PPP5CP53041 499 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 ACTR2P61160 394 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 BST2Q10589 180 aaKnown RBP12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 SLC12A1Q13621 1099 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 YIF1BQ5BJH7 314 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 TBCELQ5QJ74 424 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 TREML2Q5T2D2 321 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 EPGNQ6UW88 154 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 FAM71AQ8IYT1 594 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 KATNAL2Q8IYT4 538 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 MCOLN2Q8IZK6 566 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 AFAP1L2Q8N4X5 818 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 ACTL9Q8TC94 416 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 SLC16A10Q8TF71 515 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 ANKRD49Q8WVL7 239 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 SEPT8Q92599 483 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 MCRS1Q96EZ8 462 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 TSNARE1Q96NA8 513 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 KCNN2Q9H2S1 579 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 SLA2Q9H6Q3 261 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 JAG2Q9Y219 1238 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 AXIN2Q9Y2T1 843 aa12.65□□□□□ -0.38
SLC28A1-203ENST00000394573 E7ESA3 106 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 RNF103O00237 685 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 PRKD3O94806 890 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 CFHP08603 1231 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 FGRP09769 529 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 RALBP11234 206 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 MYL4P12829 197 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 HOXA7P31268 230 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 SHMT2P34897 504 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 HTR3AP46098 478 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 NAB1Q13506 487 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 CCNYL2Q5T2Q4 361 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 R3HCC1LQ7Z5L2 792 aaKnown RBP12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 LINC00523Q86TU6 105 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 CDR2LQ86X02 465 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 METTL4Q8N3J2 472 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 SFRP1Q8N474 314 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 LRRN4Q8WUT4 740 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 NXNL1Q96CM4 212 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 DSN1Q9H410 356 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 EFCAB1Q9HAE3 211 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 BRD7Q9NPI1 651 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 DCP1AQ9NPI6 582 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 CHRAC1Q9NRG0 131 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 LEUTXA8MZ59 168 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 FAM25AB3EWG3 89 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 FAM25CB3EWG5 89 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 FAM25GB3EWG6 89 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 PTGES3LE9PB15 166 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 PDPK1O15530 556 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 EXTL3O43909 919 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 ATP2B4P23634 1241 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 ADCY7P51828 1080 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 CTSWP56202 376 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 ALDH6A1Q02252 535 aaKnown RBP12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 SMTNL2Q2TAL5 461 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 PLA2G4EQ3MJ16 856 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 CYBRD1Q53TN4 286 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 NAPRTQ6XQN6 538 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 SH3BP5LQ7L8J4 393 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 ANKFN1Q8N957 763 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 CDC26Q8NHZ8 85 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 ZNF384Q8TF68 577 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 PROX1Q92786 737 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 ISCA1Q9BUE6 129 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 SERHL2Q9H4I8 314 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 RANGRFQ9HD47 186 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 PRDM8Q9NQV8 689 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 AGPAT3Q9NRZ7 376 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 GABBR1Q9UBS5 961 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 ZNRF3Q9ULT6 936 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 V9GYQ6 96 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 OR5K3A6NET4 321 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 GRIN3BO60391 1043 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 CHRNGP07510 517 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 ATF6P18850 670 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 POU3F3P20264 500 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 DDCP20711 480 aa12.64□□□□□ -0.39
SLC28A1-203ENST00000394573 FSHRP23945 695 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms