RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 PCDHB1Q9Y5F3 818 aa11.31□□□□□ -0.6
VTI1BP2-201ENST00000394154 CREBBPQ92793 2442 aa11.31□□□□□ -0.6
VTI1BP2-201ENST00000394154 RELNP78509 3460 aa11.31□□□□□ -0.6
VTI1BP2-201ENST00000394154 SYNJ2BP-COX16A0A087WUM0 186 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 MDM4O15151 490 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 FSBPO95073 299 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 SEMA4FO95754 770 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 CISD3P0C7P0 127 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 SFTPCP11686 197 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 TFE3P19532 575 aaPredicted RBP11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 ACP1P24666 158 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 PTPN7P35236 360 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 ARRB1P49407 418 aaPredicted RBP11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 RACK1P63244 317 aaKnown RBP11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 NME3Q13232 169 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 KRT81Q14533 505 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 PDK2Q15119 407 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 SHBQ15464 509 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 SMTNL2Q2TAL5 461 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 ARL13BQ3SXY8 428 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 TFDP3Q5H9I0 405 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 TEX35Q5T0J7 233 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 HECTD3Q5T447 861 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 TXNRD3NBQ6F5E7 133 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 AADACL2Q6P093 401 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 SPOCD1Q6ZMY3 1216 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 RSRC2Q7L4I2 434 aaKnown RBP11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 PSTKQ8IV42 348 aaKnown RBP11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 MMGT1Q8N4V1 131 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 UCMAQ8WVF2 138 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 OVCA2Q8WZ82 227 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 RAPGEF5Q92565 580 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 RNF34Q969K3 372 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 CDK5RAP1Q96SZ6 601 aaKnown RBP11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 MAK16Q9BXY0 300 aaKnown RBP11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 BTBD1Q9H0C5 482 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 POLR1BQ9H9Y6 1135 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 ASCL3Q9NQ33 180 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 OLA1Q9NTK5 396 aaKnown RBP11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 DDIT4Q9NX09 232 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 CLIC5Q9NZA1 410 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 COX16Q9P0S2 106 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 EFR3BQ9Y2G0 817 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 NUMA1Q14980 2115 aa11.3□□□□□ -0.6
VTI1BP2-201ENST00000394154 CTIFO43310 598 aaKnown RBP11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 TJP3O95049 919 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 IRF1P10914 325 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 EPHA8P29322 1005 aaPredicted RBP11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 TUBP50607 506 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 AIF1P55008 147 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 CDH6P55285 790 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 TLE1Q04724 770 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 C2orf54Q08AI8 447 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 RAB6CQ53S08 254 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 PRAMEF14Q5SWL7 426 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 MSANTD2Q6P1R3 559 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 MFSD7Q6UXD7 560 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 TPGS1Q6ZTW0 290 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 HTR3DQ70Z44 454 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 BNIPLQ7Z465 357 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 TADA2BQ86TJ2 420 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 LRRN4CLQ8ND94 238 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 DQX1Q8TE96 717 aaKnown RBP11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 PEBP4Q96S96 227 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 SNRNP25Q9BV90 132 aaKnown RBP11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 HEMGNQ9BXL5 484 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 AP1M1Q9BXS5 423 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 RAB6CQ9H0N0 254 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 NMUR1Q9HB89 426 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 HOMER3Q9NSC5 361 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 KLHL11Q9NVR0 708 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 SRPK3Q9UPE1 567 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 MAN2B2Q9Y2E5 1009 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 SLC27A6Q9Y2P4 619 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 PLXNA2O75051 1894 aa11.29□□□□□ -0.6
VTI1BP2-201ENST00000394154 USP9YO00507 2555 aaPredicted RBP11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 NBPF19A0A087WUL8 3843 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 hCG_1818297A0A087WSY0 165 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 UQCRHLA0A096LP55 91 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 CLEC18AA5D8T8 446 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 USP12O75317 370 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 UQCRHP07919 91 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 ZDHHC11BP0C7U3 371 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 SLC2A3P11169 496 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 RARGP13631 454 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 ADRA1BP35368 520 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 CDKN2BP42772 138 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 CXCR3P49682 368 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 INHBCP55103 352 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 RIPPLY3P57055 190 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 PITX1P78337 314 aaPredicted RBP11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 TFDP2Q14188 446 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 LINC00303Q3SY05 128 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 GLE1Q53GS7 698 aaKnown RBP11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 EFHC2Q5JST6 749 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 OTUD1Q5VV17 481 aaPredicted RBP11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 IGF2-ASQ6U949 168 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 CLEC18BQ6UXF7 455 aa11.28□□□□□ -0.6
VTI1BP2-201ENST00000394154 CYP4V2Q6ZWL3 525 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms