RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 TPSAB1Q15661 275 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 FAM46CQ5VWP2 391 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 ZNF776Q68DI1 518 aaPredicted RBP13.43□□□□□ -0.26
USP44-202ENST00000393091 BRAT1Q6PJG6 821 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 SERPINA13PQ6UXR4 307 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 TTC16Q8NEE8 873 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 MNS1Q8NEH6 495 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 C1orf54Q8WWF1 131 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 MCCC1Q96RQ3 725 aaPredicted RBP13.43□□□□□ -0.26
USP44-202ENST00000393091 ITM2CQ9NQX7 267 aa13.43□□□□□ -0.26
USP44-202ENST00000393091 ANXA9O76027 345 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 HOXB2P14652 356 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 IVDP26440 423 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 RGRP47804 291 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 GDF10P55107 478 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 CREB5Q02930 508 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 ZNF235Q14590 738 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 UBXN2BQ14CS0 331 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 LINGO4Q6UY18 593 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 TMEM105Q8N8V8 129 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 DTWD2Q8NBA8 298 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 ATG4AQ8WYN0 398 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 C1QTNF1Q9BXJ1 281 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 AAR2Q9Y312 384 aaKnown RBP13.42□□□□□ -0.26
USP44-202ENST00000393091 KCNN4O15554 427 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 ZBTB24O43167 697 aaPredicted RBP13.42□□□□□ -0.26
USP44-202ENST00000393091 APBB3O95704 486 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 CA4P22748 312 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 CCNHP51946 323 aaPredicted RBP13.42□□□□□ -0.26
USP44-202ENST00000393091 MTAPQ13126 283 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 MSLNQ13421 630 aaPredicted RBP13.42□□□□□ -0.26
USP44-202ENST00000393091 STARD3Q14849 445 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 ZNF805Q5CZA5 627 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 CCDC181Q5TID7 509 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 PKN3Q6P5Z2 889 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 DPY19L3Q6ZPD9 716 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 Q6ZS52 159 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 ZC3H18Q86VM9 953 aaKnown RBP13.42□□□□□ -0.26
USP44-202ENST00000393091 HOOK3Q86VS8 718 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 TSEN2Q8NCE0 465 aaKnown RBP13.42□□□□□ -0.26
USP44-202ENST00000393091 CCNYQ8ND76 341 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 MAGOHBQ96A72 148 aaKnown RBP13.42□□□□□ -0.26
USP44-202ENST00000393091 RPL10LQ96L21 214 aaKnown RBP13.42□□□□□ -0.26
USP44-202ENST00000393091 TMEM121Q9BTD3 319 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 TDRD1Q9BXT4 1180 aaKnown RBP13.42□□□□□ -0.26
USP44-202ENST00000393091 ATP13A3Q9H7F0 1226 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 RBM12Q9NTZ6 932 aaKnown RBP13.42□□□□□ -0.26
USP44-202ENST00000393091 NDRG2Q9UN36 371 aaKnown RBP13.42□□□□□ -0.26
USP44-202ENST00000393091 FARP1Q9Y4F1 1045 aaPredicted RBP13.42□□□□□ -0.26
USP44-202ENST00000393091 AP3B1O00203 1094 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 JCHAINP01591 159 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 SPDYCQ5MJ68 293 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 NEK5Q6P3R8 708 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 EIF1ADQ8N9N8 165 aaKnown RBP13.42□□□□□ -0.26
USP44-202ENST00000393091 MCUQ8NE86 351 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 PRRX2Q99811 253 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 ACTL7AQ9Y615 435 aa13.42□□□□□ -0.26
USP44-202ENST00000393091 GABRG2P18507 467 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 OXTRP30559 389 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 GEMP55040 296 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 RAD51Q06609 339 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 KIAA1211LQ6NV74 962 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 GDPD4Q6W3E5 623 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 C11orf74Q86VG3 221 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 EPHX3Q9H6B9 360 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 NFKBIL1Q9UBC1 381 aaPredicted RBP13.41□□□□□ -0.26
USP44-202ENST00000393091 RIMKLBQ9ULI2 386 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 C1QTNF3-AMACRE9PGA6 284 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 PI15O43692 258 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 LILRB5O75023 590 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 ALDH1A2O94788 518 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 PRLP01236 227 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 CD72P21854 359 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 SATB1Q01826 763 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 KCNJ11Q14654 390 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 TMEM52BQ4KMG9 183 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 Q6ZVU0 165 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 KBTBD6Q86V97 674 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 CHPFQ8IZ52 775 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 PPP1R16AQ96I34 528 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 MRGPRX1Q96LB2 322 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 FRMD8Q9BZ67 464 aaPredicted RBP13.41□□□□□ -0.26
USP44-202ENST00000393091 NOD2Q9HC29 1040 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 SCUBE2Q9NQ36 999 aa13.41□□□□□ -0.26
USP44-202ENST00000393091 H0Y858 1186 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 PGLSO95336 258 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 CNR2P34972 360 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 RPL22P35268 128 aaKnown RBP13.4□□□□□ -0.26
USP44-202ENST00000393091 MAGEA3P43357 314 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 GRIA4P48058 902 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 SEC13P55735 322 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 CDKN3Q16667 212 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 RANBP10Q6VN20 620 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 STK40Q8N2I9 435 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 FAM71DQ8N9W8 422 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 MLPHQ9BV36 600 aaPredicted RBP13.4□□□□□ -0.26
USP44-202ENST00000393091 AP1M1Q9BXS5 423 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 SUV39H2Q9H5I1 410 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 FAM153AQ9UHL3 310 aa13.4□□□□□ -0.26
USP44-202ENST00000393091 PHTF1Q9UMS5 762 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms