RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 TMCO4Q5TGY1 634 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 FAM117BQ6P1L5 589 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 DENND1CQ8IV53 801 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 PDZD8Q8NEN9 1154 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 NSL1Q96IY1 281 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 SEMA3CQ99985 751 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 C1QTNF1Q9BXJ1 281 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 AFF4Q9UHB7 1163 aaKnown RBP18.72■□□□□ 0.59
STRADB-202ENST00000392249 ZFP37Q9Y6Q3 630 aaPredicted RBP18.72■□□□□ 0.59
STRADB-202ENST00000392249 AURKAO14965 403 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 SIN3BO75182 1162 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 HMGA1P17096 107 aaKnown RBP18.72■□□□□ 0.59
STRADB-202ENST00000392249 GLRBP48167 497 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 RPS24P62847 133 aaKnown RBP18.72■□□□□ 0.59
STRADB-202ENST00000392249 TNK2Q07912 1038 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 ZNF235Q14590 738 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 SIRPB2Q5JXA9 342 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 TSTD2Q5T7W7 516 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 NEPROQ6NW34 567 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 NAPRTQ6XQN6 538 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 LONP2Q86WA8 852 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 CEP97Q8IW35 865 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.72■□□□□ 0.59
STRADB-202ENST00000392249 C2CD4AQ8NCU7 369 aaPredicted RBP18.72■□□□□ 0.59
STRADB-202ENST00000392249 OR52K2Q8NGK3 314 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 KCTD4Q8WVF5 259 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 FAM167BQ9BTA0 163 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 POLR1EQ9GZS1 481 aaKnown RBP18.72■□□□□ 0.59
STRADB-202ENST00000392249 CYP4F11Q9HBI6 524 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 PNPOQ9NVS9 261 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 FBXO5Q9UKT4 447 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 ANKRD6Q9Y2G4 727 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 ACTL7AQ9Y615 435 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 COL4A6Q14031 1691 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 CHD5Q8TDI0 1954 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 HNRNPCL1O60812 293 aaKnown RBP18.71■□□□□ 0.59
STRADB-202ENST00000392249 CD151P48509 253 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 SLC11A2P49281 568 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 MTA1Q13330 715 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 MSLNQ13421 630 aaPredicted RBP18.71■□□□□ 0.59
STRADB-202ENST00000392249 SLC12A1Q13621 1099 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 KRT72Q14CN4 511 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 GPATCH11Q8N954 259 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 OR7D4Q8NG98 312 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 OR6Y1Q8NGX8 325 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 ZNF461Q8TAF7 563 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 TADA1Q96BN2 335 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 ELMO2Q96JJ3 720 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 TSNARE1Q96NA8 513 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 ACE2Q9BYF1 805 aaPredicted RBP18.71■□□□□ 0.59
STRADB-202ENST00000392249 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.71■□□□□ 0.59
STRADB-202ENST00000392249 MNX1P50219 401 aaPredicted RBP18.71■□□□□ 0.59
STRADB-202ENST00000392249 ALDH18A1P54886 795 aaKnown RBP18.71■□□□□ 0.59
STRADB-202ENST00000392249 RAB10P61026 200 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 CENPLQ8N0S6 344 aaPredicted RBP18.71■□□□□ 0.59
STRADB-202ENST00000392249 OR13J1Q8NGT2 312 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 OVCA2Q8WZ82 227 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 VWCEQ96DN2 955 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 CEP295NLQ96MC4 621 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 RANBP9Q96S59 729 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 MIPEPQ99797 713 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 TUBB6Q9BUF5 446 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 PDFQ9HBH1 243 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 GKN1Q9NS71 199 aa18.71■□□□□ 0.59
STRADB-202ENST00000392249 CCL22O00626 93 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 CHUKO15111 745 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 CCDC22O60826 627 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 KLKB1P03952 638 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 SOD2P04179 222 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 ATXN1LP0C7T5 689 aaKnown RBP18.7■□□□□ 0.58
STRADB-202ENST00000392249 STMN1P16949 149 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 CALB2P22676 271 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 HOXD9P28356 352 aaPredicted RBP18.7■□□□□ 0.58
STRADB-202ENST00000392249 GNA12Q03113 381 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 PLD1Q13393 1074 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 TAF12Q16514 161 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 C5orf22Q49AR2 442 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 IL31Q6EBC2 164 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 CNKSR3Q6P9H4 555 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 TREML1Q86YW5 311 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 PNPLA1Q8N8W4 532 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 SCYL1Q96KG9 808 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 PRICKLE1Q96MT3 831 aaPredicted RBP18.7■□□□□ 0.58
STRADB-202ENST00000392249 SIKE1Q9BRV8 207 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 TRPM5Q9NZQ8 1165 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 RUVBL2Q9Y230 463 aaKnown RBP18.7■□□□□ 0.58
STRADB-202ENST00000392249 ATP11BQ9Y2G3 1177 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 ACOT9Q9Y305 439 aa18.7■□□□□ 0.58
STRADB-202ENST00000392249 TRIM13O60858 407 aa18.69■□□□□ 0.58
STRADB-202ENST00000392249 ABLIM3O94929 683 aa18.69■□□□□ 0.58
STRADB-202ENST00000392249 IRF1P10914 325 aa18.69■□□□□ 0.58
STRADB-202ENST00000392249 ESRRAP11474 423 aaPredicted RBP18.69■□□□□ 0.58
STRADB-202ENST00000392249 CORO1AP31146 461 aaKnown RBP18.69■□□□□ 0.58
STRADB-202ENST00000392249 ZNF789Q5FWF6 425 aa18.69■□□□□ 0.58
STRADB-202ENST00000392249 FAM91A1Q658Y4 838 aa18.69■□□□□ 0.58
STRADB-202ENST00000392249 CNSTQ6PJW8 725 aa18.69■□□□□ 0.58
STRADB-202ENST00000392249 MAVSQ7Z434 540 aa18.69■□□□□ 0.58
STRADB-202ENST00000392249 SPATA6LQ8N4H0 392 aa18.69■□□□□ 0.58
STRADB-202ENST00000392249 UNKQ9C0B0 810 aaKnown RBP18.69■□□□□ 0.58
STRADB-202ENST00000392249 YIPF1Q9Y548 306 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms