RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 CYTH1Q15438 398 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 SPA17Q15506 151 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 ATXN7L2Q5T6C5 722 aaPredicted RBP12.85□□□□□ -0.35
GGPS1-203ENST00000391855 VSIG1Q86XK7 387 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 OXR1Q8N573 874 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 ATPAF2Q8N5M1 289 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 MFSD2AQ8NA29 543 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 OR6K2Q8NGY2 324 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 SLC35G2Q8TBE7 412 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 FAM174AQ8TBP5 190 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 NSMCE1Q8WV22 266 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 TUBGCP5Q96RT8 1024 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 CINPQ9BW66 212 aaPredicted RBP12.85□□□□□ -0.35
GGPS1-203ENST00000391855 SEPT3Q9UH03 358 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 ANKRD6Q9Y2G4 727 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 FADS3Q9Y5Q0 445 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 A0A1W2PQU0 124 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 C16orf96A6NNT2 1141 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 ZNF487B1APH4 448 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 PALMO75781 387 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 PCDH8O95206 1070 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 KCNK5O95279 499 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 IPO7O95373 1038 aaKnown RBP12.84□□□□□ -0.35
GGPS1-203ENST00000391855 LCA5LO95447 670 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 FECHP22830 423 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 GJC1P36383 396 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 CTSKP43235 329 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 MAGEA1P43355 309 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 CCT8P50990 548 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 NOVA1P51513 510 aaKnown RBP12.84□□□□□ -0.35
GGPS1-203ENST00000391855 ARSEP51690 589 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 HADHBP55084 474 aaKnown RBP12.84□□□□□ -0.35
GGPS1-203ENST00000391855 RPS21P63220 83 aaKnown RBP12.84□□□□□ -0.35
GGPS1-203ENST00000391855 BNC1Q01954 994 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 DPYSL3Q14195 570 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 MESDQ14696 234 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 STAT4Q14765 748 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 KIF19Q2TAC6 998 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 HLA-BQ31612 363 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 LRRC38Q5VT99 294 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 GAS2L3Q86XJ1 694 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 TMTC1Q8IUR5 882 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 KCTD6Q8NC69 237 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 FEM1CQ96JP0 617 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 CALR3Q96L12 384 aaKnown RBP12.84□□□□□ -0.35
GGPS1-203ENST00000391855 KLHL32Q96NJ5 620 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 CALN1Q9BXU9 219 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 GAREM1Q9H706 876 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 EBF2Q9HAK2 575 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 SLCO1B1Q9Y6L6 691 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 SPTBN4Q9H254 2564 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 PLXNA2O75051 1894 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 ADAMTS9Q9P2N4 1935 aa12.84□□□□□ -0.35
GGPS1-203ENST00000391855 A0A1W2PR77 199 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 TSPAN11A1L157 253 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 TMEM110-MUSTN1A8MSY1 372 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 HNRNPA2B1P22626 353 aaKnown RBP12.83□□□□□ -0.36
GGPS1-203ENST00000391855 MAT2AP31153 395 aaKnown RBP12.83□□□□□ -0.36
GGPS1-203ENST00000391855 AKT2P31751 481 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 TAS2R40P59535 323 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 AP1S1P61966 158 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 NSUN2Q08J23 767 aaKnown RBP eCLIP12.83□□□□□ -0.36
GGPS1-203ENST00000391855 ELP6Q0PNE2 266 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 ZNF235Q14590 738 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 SUZ12Q15022 739 aaKnown RBP12.83□□□□□ -0.36
GGPS1-203ENST00000391855 PAFAH1B3Q15102 231 aaKnown RBP12.83□□□□□ -0.36
GGPS1-203ENST00000391855 ZNF423Q2M1K9 1284 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 INAVAQ3KP66 663 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 TMEM259Q4ZIN3 620 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 RALGPS1Q5JS13 557 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 ZFYVE27Q5T4F4 411 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 CFAP58Q5T655 872 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 PIP4P1Q86T03 277 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 ASB12Q8WXK4 309 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 FAF2Q96CS3 445 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 EXOC2Q96KP1 924 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 ZNF641Q96N77 438 aaPredicted RBP12.83□□□□□ -0.36
GGPS1-203ENST00000391855 PSKH2Q96QS6 385 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 ATP13A3Q9H7F0 1226 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 GDF3Q9NR23 364 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 TM7SF3Q9NS93 570 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 HAUS2Q9NVX0 235 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 SNX11Q9Y5W9 270 aa12.83□□□□□ -0.36
GGPS1-203ENST00000391855 DMXL1Q9Y485 3027 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 A0A0A6YYK5 440 aaPredicted RBP12.82□□□□□ -0.36
GGPS1-203ENST00000391855 A0A1W2PQ67 120 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 GOLGA6L6A8MZA4 724 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 RNF103O00237 685 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 NEMP1O14524 444 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 AREL1O15033 823 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 FLRT2O43155 660 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 ADRB1P08588 477 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 CD59P13987 128 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 XPAP23025 273 aaPredicted RBP12.82□□□□□ -0.36
GGPS1-203ENST00000391855 IL4RP24394 825 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 SERPINA4P29622 427 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 CDC25BP30305 580 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 GKP32189 559 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 ABL2P42684 1182 aa12.82□□□□□ -0.36
GGPS1-203ENST00000391855 LBRQ14739 615 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms