RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 CLDN7O95471 211 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 FAM157CP0CG43 387 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 PRB4P10163 310 aaPredicted RBP-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 CD99P14209 185 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 FDPSP14324 419 aaKnown RBP-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 RBMS1P29558 406 aaKnown RBP-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 CHRNA5P30532 468 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 NTSR1P30989 418 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 SLC6A12P48065 614 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 PAX8Q06710 450 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 GAGE5Q13069 117 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 GAGE6Q13070 117 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 OLIG2Q13516 323 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 BMS1Q14692 1282 aaKnown RBP-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 SF3A2Q15428 464 aaKnown RBP-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 ELF2Q15723 593 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 INSCQ1MX18 579 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 ZC2HC1CQ53FD0 456 aaPredicted RBP-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 THEMIS2Q5TEJ8 643 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 FAM90A2PQ658T7 463 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 ACSM6Q6P461 480 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 IQCHQ86VS3 1027 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 CCDC25Q86WR0 208 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 TMEM219Q86XT9 240 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 YAF2Q8IY57 180 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 RBFAQ8N0V3 343 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 BBS10Q8TAM1 723 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 IP6K1Q92551 441 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 GTF3AQ92664 365 aaKnown RBP-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 NUS1Q96E22 293 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 STAMBPL1Q96FJ0 436 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 CSF3RQ99062 836 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 TARS2Q9BW92 718 aaKnown RBP-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 WNT5BQ9H1J7 359 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 ACTR5Q9H9F9 607 aaPredicted RBP-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 PNPOQ9NVS9 261 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 AFF4Q9UHB7 1163 aaKnown RBP-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 USP24Q9UPU5 2620 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 PCNX2A6NKB5 2137 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 NID2Q14112 1375 aa-0.32□□□□□ -2.46
TRAJ53-201ENST00000390485 hDV102S1A0JD36 115 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 TRIM75PA6NK02 468 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 PALM2-AKAP2B1ALY0 433 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 SNX2O60749 519 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 RFPL2O75678 378 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 IGKV1D-16P01601 117 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 SELLP14151 372 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 C5AR1P21730 350 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 ZFP36L2P47974 494 aaKnown RBP-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 MMP14P50281 582 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 EPHB1P54762 984 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 SLC37A1P57057 533 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 RIPK4P57078 832 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 FAPQ12884 760 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 SQSTM1Q13501 440 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 STAT4Q14765 748 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 DHCR24Q15392 516 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 CCDC157Q569K6 752 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 TECRLQ5HYJ1 363 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 LMBRD2Q68DH5 695 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 PWWP2BQ6NUJ5 590 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 ERAP2Q6P179 960 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 CCDC129Q6ZRS4 1044 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 Q6ZS52 159 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 ZNF611Q8N823 705 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 SLC43A3Q8NBI5 491 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 GPT2Q8TD30 523 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 SSC4DQ8WTU2 575 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 SEMA4DQ92854 862 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 TMEM18Q96B42 140 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 LRFN5Q96NI6 719 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 TRAPPC9Q96Q05 1148 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 ARID3AQ99856 593 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 SYT15Q9BQS2 421 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 MMTAG2Q9BU76 263 aaKnown RBP-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 MSTO1Q9BUK6 570 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 ZNF700Q9H0M5 742 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 TFB2MQ9H5Q4 396 aaKnown RBP-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 IFT22Q9H7X7 185 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 GNB4Q9HAV0 340 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 LMBRD1Q9NUN5 540 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 TMEM51Q9NW97 253 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 ADPRHL2Q9NX46 363 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 PSAT1Q9Y617 370 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 MYO16Q9Y6X6 1858 aa-0.33□□□□□ -2.46
TRAJ53-201ENST00000390485 IGKV1D-17A0A075B6S4 117 aa-0.34□□□□□ -2.46
TRAJ53-201ENST00000390485 LOC102723971A0A1B0GUV8 181 aa-0.34□□□□□ -2.46
TRAJ53-201ENST00000390485 MEX3AA1L020 520 aaKnown RBP-0.34□□□□□ -2.46
TRAJ53-201ENST00000390485 ACOD1A6NK06 481 aa-0.34□□□□□ -2.46
TRAJ53-201ENST00000390485 NDUFS7O75251 213 aa-0.34□□□□□ -2.46
TRAJ53-201ENST00000390485 DUS4LO95620 317 aaKnown RBP-0.34□□□□□ -2.46
TRAJ53-201ENST00000390485 CAVIN2O95810 425 aa-0.34□□□□□ -2.46
TRAJ53-201ENST00000390485 MMP3P08254 477 aa-0.34□□□□□ -2.46
TRAJ53-201ENST00000390485 GYS1P13807 737 aa-0.34□□□□□ -2.46
TRAJ53-201ENST00000390485 MMP8P22894 467 aa-0.34□□□□□ -2.46
TRAJ53-201ENST00000390485 IL4RP24394 825 aa-0.34□□□□□ -2.46
TRAJ53-201ENST00000390485 PBX1P40424 430 aa-0.34□□□□□ -2.46
TRAJ53-201ENST00000390485 STAT1P42224 750 aa-0.34□□□□□ -2.46
TRAJ53-201ENST00000390485 DPP6P42658 865 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms