RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 CDRT15L2A8MXV6 281 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 LMO7DNF2Z398 122 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 TMX2-CTNND1H3BSU7 103 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 KRIT1O00522 736 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 GADD45BO75293 160 aaPredicted RBP16.24■□□□□ 0.19
VCX3A-201ENST00000381089 TNFSF15O95150 251 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 GSRP00390 522 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 CDH5P33151 784 aaPredicted RBP16.24■□□□□ 0.19
VCX3A-201ENST00000381089 MAPKAPK2P49137 400 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 BLKP51451 505 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 ADKP55263 362 aaKnown RBP16.24■□□□□ 0.19
VCX3A-201ENST00000381089 SKOR1P84550 965 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 RAD51Q06609 339 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 EIF2B5Q13144 721 aaKnown RBP16.24■□□□□ 0.19
VCX3A-201ENST00000381089 FAXCQ5TGI0 409 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 CRTC1Q6UUV9 634 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 FAM131BQ86XD5 332 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 XYLT1Q86Y38 959 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 FAM71AQ8IYT1 594 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 OR2AP1Q8NGE2 309 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 CXorf40AQ8TE69 158 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 TMPRSS4Q9NRS4 437 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 ZNF212Q9UDV6 495 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 SSUH2Q9Y2M2 353 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 TENM4Q6N022 2769 aa16.24■□□□□ 0.19
VCX3A-201ENST00000381089 GOLGA8SH3BPF8 625 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 SPINT1O43278 529 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 TM7SF2O76062 418 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 POP4O95707 220 aaKnown RBP16.23■□□□□ 0.19
VCX3A-201ENST00000381089 LSM8O95777 96 aaKnown RBP16.23■□□□□ 0.19
VCX3A-201ENST00000381089 UGT2B4P06133 528 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 ITGA2BP08514 1039 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 CYP11B1P15538 503 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 FLT3P36888 993 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 ABL2P42684 1182 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 PPARDQ03181 441 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 EIF3IQ13347 325 aaKnown RBP16.23■□□□□ 0.19
VCX3A-201ENST00000381089 RAPGEF1Q13905 1077 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 ZSCAN23Q3MJ62 389 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 PERM1Q5SV97 790 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 RWDD4Q6NW29 188 aaKnown RBP16.23■□□□□ 0.19
VCX3A-201ENST00000381089 MACC1Q6ZN28 852 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 ARCQ7LC44 396 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 CLEC14AQ86T13 490 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 VPS36Q86VN1 386 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 FAM114A1Q8IWE2 563 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 RBFAQ8N0V3 343 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 FSTL5Q8N475 847 aaPredicted RBP16.23■□□□□ 0.19
VCX3A-201ENST00000381089 OR6K2Q8NGY2 324 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 CFAP57Q96MR6 1250 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 CCDC3Q9BQI4 270 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.23■□□□□ 0.19
VCX3A-201ENST00000381089 CLMPQ9H6B4 373 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 WDR70Q9NW82 654 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 PADI4Q9UM07 663 aa16.23■□□□□ 0.19
VCX3A-201ENST00000381089 RP1P56715 2156 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 ALPIP09923 528 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 PNMA6AP0CW24 399 aaPredicted RBP16.22■□□□□ 0.19
VCX3A-201ENST00000381089 PRKCSHP14314 528 aaPredicted RBP16.22■□□□□ 0.19
VCX3A-201ENST00000381089 KCNC4Q03721 635 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 C1orf61Q13536 156 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 ELOCQ15369 112 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 MAN2A1Q16706 1144 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 TPRG1LQ5T0D9 272 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 TTC7BQ86TV6 843 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 ZNF354CQ86Y25 554 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 SLC35F3Q8IY50 421 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 ARHGEF2Q92974 986 aaKnown RBP16.22■□□□□ 0.19
VCX3A-201ENST00000381089 CENPTQ96BT3 561 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 PRR11Q96HE9 360 aaPredicted RBP16.22■□□□□ 0.19
VCX3A-201ENST00000381089 KLHL32Q96NJ5 620 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 CCNL2Q96S94 520 aaPredicted RBP16.22■□□□□ 0.19
VCX3A-201ENST00000381089 LRRC61Q9BV99 259 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 SEMA4CQ9C0C4 833 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 STRADBQ9C0K7 418 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 MAGEH1Q9H213 219 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 SIX2Q9NPC8 291 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 OR12D3Q9UGF7 316 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 AJAP1Q9UKB5 411 aaPredicted RBP16.22■□□□□ 0.19
VCX3A-201ENST00000381089 ITM2BQ9Y287 266 aa16.22■□□□□ 0.19
VCX3A-201ENST00000381089 A0A1W2PNU3 283 aaPredicted RBP16.21■□□□□ 0.19
VCX3A-201ENST00000381089 ZSCAN5CA6NGD5 496 aaPredicted RBP16.21■□□□□ 0.19
VCX3A-201ENST00000381089 YY2O15391 372 aa16.21■□□□□ 0.19
VCX3A-201ENST00000381089 SLC28A2O43868 658 aa16.21■□□□□ 0.19
VCX3A-201ENST00000381089 RAMP2O60895 175 aa16.21■□□□□ 0.19
VCX3A-201ENST00000381089 GCATO75600 419 aa16.21■□□□□ 0.19
VCX3A-201ENST00000381089 CTSEP14091 401 aa16.21■□□□□ 0.19
VCX3A-201ENST00000381089 TSHRP16473 764 aa16.21■□□□□ 0.19
VCX3A-201ENST00000381089 RHOQP17081 205 aa16.21■□□□□ 0.19
VCX3A-201ENST00000381089 XPAP23025 273 aaPredicted RBP16.21■□□□□ 0.19
VCX3A-201ENST00000381089 GKP32189 559 aa16.21■□□□□ 0.19
VCX3A-201ENST00000381089 IGFALSP35858 605 aa16.21■□□□□ 0.19
VCX3A-201ENST00000381089 ACVRL1P37023 503 aa16.21■□□□□ 0.19
VCX3A-201ENST00000381089 EIF4A3P38919 411 aaKnown RBP16.21■□□□□ 0.19
VCX3A-201ENST00000381089 ATP11AP98196 1134 aa16.21■□□□□ 0.19
VCX3A-201ENST00000381089 NRG1Q02297 640 aaPredicted RBP16.21■□□□□ 0.19
VCX3A-201ENST00000381089 DRAP1Q14919 205 aaPredicted RBP16.21■□□□□ 0.19
VCX3A-201ENST00000381089 MYLK3Q32MK0 819 aa16.21■□□□□ 0.19
VCX3A-201ENST00000381089 TAF3Q5VWG9 929 aa16.21■□□□□ 0.19
VCX3A-201ENST00000381089 KIAA1614Q5VZ46 1190 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms