RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 RPS6P62753 249 aaKnown RBP9.46□□□□□ -0.89
PTPRA-204ENST00000380393 GALEQ14376 348 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 MESDQ14696 234 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 TYSND1Q2T9J0 566 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 FRMD7Q6ZUT3 714 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 ARCQ7LC44 396 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 PTAR1Q7Z6K3 402 aaPredicted RBP9.46□□□□□ -0.89
PTPRA-204ENST00000380393 FBXO33Q7Z6M2 555 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 SPATA2LQ8IUW3 424 aaPredicted RBP9.46□□□□□ -0.89
PTPRA-204ENST00000380393 LRRC47Q8N1G4 583 aaKnown RBP9.46□□□□□ -0.89
PTPRA-204ENST00000380393 CCDC185Q8N715 623 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 OR13F1Q8NGS4 319 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 TEX47Q8TBZ9 253 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 ALKBH8Q96BT7 664 aaKnown RBP9.46□□□□□ -0.89
PTPRA-204ENST00000380393 ZNF512BQ96KM6 892 aaPredicted RBP9.46□□□□□ -0.89
PTPRA-204ENST00000380393 CSF3RQ99062 836 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 DHX33Q9H6R0 707 aaKnown RBP9.46□□□□□ -0.89
PTPRA-204ENST00000380393 MAGEF1Q9HAY2 307 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 PCNTO95613 3336 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 NID2Q14112 1375 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 HMX3A6NHT5 357 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 BTN3A1O00481 513 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 AKAP10O43572 662 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 XRCC1P18887 633 aaPredicted RBP9.46□□□□□ -0.89
PTPRA-204ENST00000380393 GP5P40197 560 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 PLD1Q13393 1074 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 GRTP1Q5TC63 336 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 DPP8Q6V1X1 898 aaPredicted RBP9.46□□□□□ -0.89
PTPRA-204ENST00000380393 DPY19L3Q6ZPD9 716 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 SPATC1Q76KD6 591 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 C12orf56Q8IXR9 622 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 SCML4Q8N228 414 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 RNF148Q8N7C7 305 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 DAGLBQ8NCG7 672 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 OR2T34Q8NGX1 318 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 ASB12Q8WXK4 309 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 SLC9A6Q92581 669 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 TNIP3Q96KP6 325 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 SAV1Q9H4B6 383 aaPredicted RBP9.46□□□□□ -0.89
PTPRA-204ENST00000380393 C6orf50Q9HD87 102 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 ITM2CQ9NQX7 267 aa9.46□□□□□ -0.89
PTPRA-204ENST00000380393 CLDN3O15551 220 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 LRRN2O75325 713 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 IL1BP01584 269 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 NTRK1P04629 796 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 ATP5BP06576 529 aaKnown RBP9.46□□□□□ -0.9
PTPRA-204ENST00000380393 PROS1P07225 676 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 TMEM191BP0C7N4 346 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 CAPZA2P47755 286 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 SSTP61278 116 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 MGAT3Q09327 533 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 GRM7Q14831 915 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 SIX1Q15475 284 aaPredicted RBP9.46□□□□□ -0.9
PTPRA-204ENST00000380393 PLEKHG6Q3KR16 790 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 ALG1LQ6GMV1 187 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 KCNT2Q6UVM3 1135 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.46□□□□□ -0.9
PTPRA-204ENST00000380393 FBXO11Q86XK2 927 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 CELF2-AS1Q8N7Q2 184 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 ZBTB44Q8NCP5 570 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 SLC44A5Q8NCS7 719 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 SLC47A1Q96FL8 570 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 SCYL1Q96KG9 808 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 PNMA5Q96PV4 448 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 TUBA1CQ9BQE3 449 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 FBXO28Q9NVF7 368 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 SLCO3A1Q9UIG8 710 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 PRR12Q9ULL5 1215 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 NENFQ9UMX5 172 aa9.46□□□□□ -0.9
PTPRA-204ENST00000380393 OR6C65A6NJZ3 312 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 ZBTB5O15062 677 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 TBX1O43435 398 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 MT-ND3P03897 115 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 XRCC5P13010 732 aaKnown RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 HOXB3P14651 431 aaPredicted RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 IMPDH1P20839 514 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 RPL35P42766 123 aaKnown RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 PRIM2P49643 509 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 OR2B6P58173 313 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 MFSD13AQ14CX5 517 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 FASTKD3Q14CZ7 662 aaKnown RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 SGCAQ16586 387 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 ARHGEF16Q5VV41 709 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 SULT1C3Q6IMI6 304 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 TMEM65Q6PI78 240 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 USP17L2Q6R6M4 530 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 CRTC3Q6UUV7 619 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 ARHGAP36Q6ZRI8 547 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 ZBTB49Q6ZSB9 765 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 STK32CQ86UX6 486 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 LYSMD2Q8IV50 215 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 NLGN2Q8NFZ4 835 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 TFB1MQ8WVM0 346 aaKnown RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 RAD54LQ92698 747 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 TBC1D20Q96BZ9 403 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 CNDP2Q96KP4 475 aaKnown RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 TEKT5Q96M29 485 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 CDRT15Q96T59 188 aa9.45□□□□□ -0.9
PTPRA-204ENST00000380393 MLPHQ9BV36 600 aaPredicted RBP9.45□□□□□ -0.9
PTPRA-204ENST00000380393 APOL6Q9BWW8 343 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms