RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 KXD1Q9BQD3 176 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 TMEM109Q9BVC6 243 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 ACBD3Q9H3P7 528 aa12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 FCF1Q9Y324 198 aaKnown RBP12.14□□□□□ -0.47
EXOSC9-202ENST00000379663 LRRK1Q38SD2 2015 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 TTC24A2A3L6 582 aaPredicted RBP12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 SDR42E2A6NKP2 422 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 H3BQ06 376 aaPredicted RBP12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 K7ERQ8 282 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 INSIG1O15503 277 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 SMAD6O43541 496 aaKnown RBP12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 PMPCBO75439 489 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 SPAG6O75602 509 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 AGTP01019 485 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 EPOP01588 193 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 C1QAP02745 245 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 SERPINF2P08697 491 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 ATXN1LP0C7T5 689 aaKnown RBP12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 MGAT1P26572 445 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 SSTR1P30872 391 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 CTSOP43234 321 aaPredicted RBP12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 CSNK1DP48730 415 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 DGKGP49619 791 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 RHOAP61586 193 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 ZNF844Q08AG5 666 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 MSLNQ13421 630 aaPredicted RBP12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 SMAD4Q13485 552 aaKnown RBP12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 GRM2Q14416 872 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 GEN1Q17RS7 908 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 HP1BP3Q5SSJ5 553 aaPredicted RBP12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 ARMC3Q5W041 872 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 STEAP4Q687X5 459 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 MTERF4Q7Z6M4 381 aaKnown RBP12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 PHTF2Q8N3S3 785 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 CPA6Q8N4T0 437 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 NAT16Q8N8M0 369 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 ST13P5Q8NFI4 369 aaPredicted RBP12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 WFIKKN2Q8TEU8 576 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 VOPP1Q96AW1 172 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 ISG20Q96AZ6 181 aaKnown RBP12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 FEM1CQ96JP0 617 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 EXOC2Q96KP1 924 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 NAT9Q9BTE0 207 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 FICDQ9BVA6 458 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 FSD1LQ9BXM9 530 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 CEP44Q9C0F1 390 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 IL22Q9GZX6 179 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 UBE2ZQ9H832 354 aaPredicted RBP12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 NOD2Q9HC29 1040 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 SYBUQ9NX95 663 aa12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.13□□□□□ -0.47
EXOSC9-202ENST00000379663 MBTPS2O43462 519 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 TCEA3O75764 348 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 GSTA2P09210 222 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 EIF2DP41214 584 aaKnown RBP12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 NPY2RP49146 381 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 STK19P49842 368 aaPredicted RBP12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 AP1S1P61966 158 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 ECT2LQ008S8 904 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 RUNX3Q13761 415 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 SLC1A5Q15758 541 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 MBLAC2Q68D91 279 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 C22orf39Q6P5X5 142 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 NCEH1Q6PIU2 408 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 UNC5AQ6ZN44 842 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 CCNJLQ8IV13 435 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 OR2W6PQ8NHA6 318 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 MYO19Q96H55 970 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 PKNOX2Q96KN3 472 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 MRGPRX3Q96LB0 322 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 APOL2Q9BQE5 337 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 RPP25Q9BUL9 199 aaKnown RBP12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 TDRD1Q9BXT4 1180 aaKnown RBP12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 PIH1D1Q9NWS0 290 aaKnown RBP12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 EURLQ9NYK6 297 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 FETUBQ9UGM5 382 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 ZC3H7BQ9UGR2 993 aaKnown RBP12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 SLC25A13Q9UJS0 675 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 NUMBLQ9Y6R0 609 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 ATG2BQ96BY7 2078 aa12.12□□□□□ -0.47
EXOSC9-202ENST00000379663 A0A087WUV0 522 aaPredicted RBP12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 TCRBV9S1A1TA0A576 114 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 ATP9BO43861 1147 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 SYF2O95926 243 aaKnown RBP12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 CPP00450 1065 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 ASLP04424 464 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 PGAM1P18669 254 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 HLA-DPA1P20036 260 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 GJA4P35212 333 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 PHBP35232 272 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 OPRD1P41143 372 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 CHRNA4P43681 627 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 SCNN1BP51168 640 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 SESN2P58004 480 aaPredicted RBP12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 CRADDP78560 199 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 CDK18Q07002 472 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 MESP2Q0VG99 397 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 PCSK7Q16549 785 aa12.11□□□□□ -0.47
EXOSC9-202ENST00000379663 PTPRNQ16849 979 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms