RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 MNDAP41218 407 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 GXYLT1Q4G148 440 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 SLC25A25Q6KCM7 469 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 KYAT3Q6YP21 454 aaKnown RBP11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 RAB11FIP2Q7L804 512 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 FAM98AQ8NCA5 519 aaKnown RBP11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 AIF1LQ9BQI0 150 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 A0A087WXM4 84 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 ACAT1P24752 427 aaKnown RBP11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 FMO4P31512 558 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 GNALP38405 381 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 CKAP2Q8WWK9 683 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 SH2D3AQ9BRG2 576 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 NRDE2Q9H7Z3 1164 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 PLGP00747 810 aaPredicted RBP11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 NR2F1P10589 423 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 ADSSL1Q8N142 457 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 PRICKLE1Q96MT3 831 aaPredicted RBP11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 RNF208Q9H0X6 261 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 IFT52Q9Y366 437 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 GPC6Q9Y625 555 aaPredicted RBP11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 PTGES3LE9PB15 166 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 SLC35G4P0C7Q5 338 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 AKR1A1P14550 325 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 SHQ1Q6PI26 577 aaKnown RBP11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 ZDHHC13Q8IUH4 622 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 FAM151AQ8WW52 585 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 KAT5Q92993 513 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 ARL5CA6NH57 179 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 AGRPO00253 132 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 FGF10O15520 208 aaPredicted RBP11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 MSLNQ13421 630 aaPredicted RBP11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 MFSD10Q14728 455 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 C16orf86Q6ZW13 317 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 TBCBQ99426 244 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 HMX1Q9NP08 348 aaPredicted RBP11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 AREL1O15033 823 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 IL12BP29460 328 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 TMPRSS11AQ6ZMR5 421 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 TNKS2Q9H2K2 1166 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 GTF3C4Q9UKN8 822 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 JCADQ9P266 1359 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 DYTNA2CJ06 578 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 CDH4P55283 916 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 SELENOVP59797 346 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 FSCN1Q16658 493 aaKnown RBP11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 DEFB107AQ8IZN7 70 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 DLG3Q92796 817 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 RNF31Q96EP0 1072 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 CHCHD6Q9BRQ6 235 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 CHMP1AQ9HD42 196 aaPredicted RBP11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 FKBP6O75344 327 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 CCR3P51677 355 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 NFIXQ14938 502 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 PAFAH2Q99487 392 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 MEMO1Q9Y316 297 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 KDM6BO15054 1643 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 F8VZ95 297 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 CHKAP35790 457 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 ZDHHC20Q5W0Z9 365 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 SELENOMQ8WWX9 145 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 AGPAT3Q9NRZ7 376 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 A0A096LPK6 155 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 C1orf232A0A0U1RR37 186 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 PPP3R2Q96LZ3 170 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 FAM118BQ9BPY3 351 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 TCF25Q9BQ70 676 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 BTN3A1O00481 513 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 ITPKBP27987 946 aa11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 NOL6Q9H6R4 1146 aaKnown RBP11.32□□□□□ -0.6
PTCHD1-201ENST00000379361 CACNA2D1P54289 1103 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 MARCH10Q8NA82 808 aaPredicted RBP11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 FERD3LQ96RJ6 166 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 CRB1P82279 1406 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 MTHFD1P11586 935 aaKnown RBP11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 MAPK14Q16539 360 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 WDR59Q6PJI9 974 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 MB21D2Q8IYB1 491 aaPredicted RBP11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 OR10G6Q8NH81 332 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 PRDM16Q9HAZ2 1276 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 RIIAD1A6NNX1 92 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 TRIM38O00635 465 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 SYVN1Q86TM6 617 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 IL22Q9GZX6 179 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 RBM22Q9NW64 420 aaKnown RBP eCLIP11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 RNF17Q9BXT8 1623 aaKnown RBP11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 PSIP1O75475 530 aaKnown RBP11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 ZNF410Q86VK4 478 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 CELF1Q92879 486 aaKnown RBP11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 COX4I2Q96KJ9 171 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 PDGFDQ9GZP0 370 aaPredicted RBP11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 POMKQ9H5K3 350 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 ARMCX1Q9P291 453 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 PHTF1Q9UMS5 762 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 UMODL1Q5DID0 1318 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 RLN1P04808 185 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 GJA8P48165 433 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 PTPN11Q06124 597 aaPredicted RBP11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 HDDC3Q8N4P3 179 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms