RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 NR3C2P08235 984 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 OSBPP22059 807 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 MSX2P35548 267 aaPredicted RBP11.88□□□□□ -0.51
NPHP4-202ENST00000378161 TFAMQ00059 246 aaKnown RBP11.88□□□□□ -0.51
NPHP4-202ENST00000378161 CCNIQ14094 377 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 DGCR6Q14129 220 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 KCTD2Q14681 263 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 COG2Q14746 738 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 FUT11Q495W5 492 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 C16orf46Q6P387 395 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 VCPIP1Q96JH7 1222 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 MSTO1Q9BUK6 570 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 ADI1Q9BV57 179 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 LRRC4CQ9HCJ2 640 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 KRT84Q9NSB2 600 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 SLC17A7Q9P2U7 560 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 NR2E1Q9Y466 385 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 AKAP3O75969 853 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 PSMA2P25787 234 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 ALDH3B2P48448 385 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 CLCQ05315 142 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 LGALS3BPQ08380 585 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 SLC12A1Q13621 1099 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 IL17AQ16552 155 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 FAM160B1Q5W0V3 765 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 MPP5Q8N3R9 675 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 PIWIL2Q8TC59 973 aaKnown RBP11.88□□□□□ -0.51
NPHP4-202ENST00000378161 ELMO1Q92556 727 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 TNFRSF25Q93038 417 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 TCEAL3Q969E4 200 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 TP53INP1Q96A56 240 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 ARHGEF26Q96DR7 871 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 USB1Q9BQ65 265 aaKnown RBP11.88□□□□□ -0.51
NPHP4-202ENST00000378161 COPS4Q9BT78 406 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 MCMBPQ9BTE3 642 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 KCNN2Q9H2S1 579 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 NOL11Q9H8H0 719 aaKnown RBP11.88□□□□□ -0.51
NPHP4-202ENST00000378161 MPP6Q9NZW5 540 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 HUS1O60921 280 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 TP53P04637 393 aaPredicted RBP11.88□□□□□ -0.51
NPHP4-202ENST00000378161 C8BP07358 591 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 DDCP20711 480 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 PSMC5P62195 406 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 RACK1P63244 317 aaKnown RBP11.88□□□□□ -0.51
NPHP4-202ENST00000378161 APOFQ13790 326 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 TFDP2Q14188 446 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 BTBD16Q32M84 506 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 CCNYL2Q5T2Q4 361 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 PPP1R26Q5T8A7 1209 aaPredicted RBP11.88□□□□□ -0.51
NPHP4-202ENST00000378161 VWA5B1Q5TIE3 1220 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 DCAF15Q66K64 600 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 P3H2Q8IVL5 708 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 DEPDC1BQ8WUY9 529 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 MYDGFQ969H8 173 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 SCYL1Q96KG9 808 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 GJD4Q96KN9 370 aaPredicted RBP11.88□□□□□ -0.51
NPHP4-202ENST00000378161 PPP1R36Q96LQ0 422 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 C12orf57Q99622 126 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 BTBD2Q9BX70 525 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 AGPAT3Q9NRZ7 376 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 SLC22A1O15245 554 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 SGCEO43556 437 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 TFE3P19532 575 aaPredicted RBP11.88□□□□□ -0.51
NPHP4-202ENST00000378161 IMPDH1P20839 514 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 GRK3P35626 688 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 CASP4P49662 377 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 RPP38P78345 283 aaKnown RBP11.88□□□□□ -0.51
NPHP4-202ENST00000378161 PTK6Q13882 451 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 TMEM119Q4V9L6 283 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 SP8Q8IXZ3 490 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 TMCO6Q96DC7 493 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 TINF2Q9BSI4 451 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 RTKNQ9BST9 563 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 TXLNGYQ9BZA5 131 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 RBM38Q9H0Z9 239 aaKnown RBP11.88□□□□□ -0.51
NPHP4-202ENST00000378161 IFT46Q9NQC8 304 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 FEM1BQ9UK73 627 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 BOLA1Q9Y3E2 137 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 VEGFAP15692 232 aaPredicted RBP11.87□□□□□ -0.51
NPHP4-202ENST00000378161 GNA15P30679 374 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 ABCE1P61221 599 aaKnown RBP11.87□□□□□ -0.51
NPHP4-202ENST00000378161 AGAP6Q5VW22 663 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 PTAR1Q7Z6K3 402 aaPredicted RBP11.87□□□□□ -0.51
NPHP4-202ENST00000378161 ADAMTSL2Q86TH1 951 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 TIGD4Q8IY51 512 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 PARP8Q8N3A8 854 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 AGAP4Q96P64 663 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 PKP2Q99959 881 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 TDRD3Q9H7E2 651 aaKnown RBP11.87□□□□□ -0.51
NPHP4-202ENST00000378161 MCCC2Q9HCC0 563 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 SFMBT1Q9UHJ3 866 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 PTTG1O95997 202 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 MMP10P09238 476 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 CAPGP40121 348 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 SLC26A3P40879 764 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 PTPN5P54829 565 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 BTN1A1Q13410 526 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 MROH9Q5TGP6 573 aa11.87□□□□□ -0.51
NPHP4-202ENST00000378161 PDZD4Q76G19 769 aaPredicted RBP11.87□□□□□ -0.51
NPHP4-202ENST00000378161 ARCQ7LC44 396 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms