RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 ARFIP2P53365 341 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 ABRQ12979 859 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 RAB33AQ14088 237 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 MAP7Q14244 749 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 PLA2G4EQ3MJ16 856 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 APTXQ7Z2E3 356 aaKnown RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 METTL3Q86U44 580 aaKnown RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 RTN4RL1Q86UN2 441 aaPredicted RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 C10orf67Q8IYJ2 551 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 TDHQ8IZJ6 230 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 DEFB123Q8N688 67 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 TEKT4Q8WW24 435 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 SORCS1Q8WY21 1168 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 SRPK1Q96SB4 655 aaKnown RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 COPS8Q99627 209 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 IL22Q9GZX6 179 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 CYLDQ9NQC7 956 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 IMP3Q9NV31 184 aaKnown RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 CIDEBQ9UHD4 219 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 BTN3A1O00481 513 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 GNGT2O14610 69 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 OAZ2O95190 189 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 PYGBP11216 843 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 TFE3P19532 575 aaPredicted RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 PROZP22891 400 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 PBX2P40425 430 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 HNF4AP41235 474 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 CDKN2BP42772 138 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 AIF1P55008 147 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 TBCCQ15814 346 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 EML3Q32P44 896 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 PCID2Q5JVF3 399 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 FNBP1LQ5T0N5 605 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 COL13A1Q5TAT6 717 aaPredicted RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 MTSS1LQ765P7 747 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 ALLCQ8N6M5 410 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 OR10G6Q8NH81 332 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 PHOSPHO2Q8TCD6 241 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 MCOLN3Q8TDD5 553 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 CTNNAL1Q9UBT7 734 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 HS3ST4Q9Y661 456 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 AHCTF1Q8WYP5 2266 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 GOLGA8QA0A0J9YX86 632 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 LINC01553A4QN01 128 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 GOLGA8OA6NCC3 632 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 ZNF840PA6NDX5 716 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 GOLGA8NF8WBI6 632 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 MEFVO15553 781 aaPredicted RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 CHRNA4P43681 627 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 CHI3L2Q15782 390 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 ZSCAN26Q16670 478 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 KBTBD12Q3ZCT8 623 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 SPDYE7PQ495Y7 208 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 ARSIQ5FYB1 569 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 OLFML1Q6UWY5 402 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 PRPF39Q86UA1 669 aaKnown RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 C2orf73Q8N5S3 287 aaPredicted RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 KBTBD7Q8WVZ9 684 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 FAXDC2Q96IV6 333 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 SHDQ96IW2 340 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 PRMT1Q99873 361 aaKnown RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 EML4Q9HC35 981 aaKnown RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 CDK5RAP2Q96SN8 1893 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 LCHNA4D1U4 455 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 LRRC72A6NJI9 287 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 OR2AG2A6NM03 316 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 FSCN2O14926 492 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 H2AFYO75367 372 aaKnown RBP8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 RASGRP1O95267 797 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 PCCBP05166 539 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 FAM153BP0C7A2 387 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 PCNAP12004 261 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 HSPA9P38646 679 aaKnown RBP8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 GP5P40197 560 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 MAGEA11P43364 429 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 SLC10A7Q0GE19 358 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 PDCD2Q16342 344 aaPredicted RBP8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 FAM153CQ494X1 144 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 IFNEQ86WN2 208 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 HID1Q8IV36 788 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 SMARCD2Q92925 531 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 PANX3Q96QZ0 392 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 ACOX2Q99424 681 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 TACO1Q9BSH4 297 aaKnown RBP8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 KATNBL1Q9H079 304 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 LINC00597Q9H2U6 94 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 FAM124BQ9H5Z6 455 aaPredicted RBP8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 ARL15Q9NXU5 204 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 GMEB2Q9UKD1 530 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 BACE2Q9Y5Z0 518 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 PMM2O15305 246 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 CHN1P15882 459 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 MC4RP32245 332 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 IRS1P35568 1242 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 PXNP49023 591 aaPredicted RBP8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 AARSP49588 968 aaKnown RBP eCLIP8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 NOMO1Q15155 1222 aa8.54□□□□□ -1.04
CRNKL1-202ENST00000377340 UAP1L1Q3KQV9 507 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms