RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 TAS2R39P59534 338 aa25.58■■□□□ 1.68
C9orf40-201ENST00000376854 TLR1Q15399 786 aa25.58■■□□□ 1.68
C9orf40-201ENST00000376854 SH2D4BQ5SQS7 431 aa25.58■■□□□ 1.68
C9orf40-201ENST00000376854 C15orf38-AP3S2A0A0A6YYH1 394 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 STX16-NPEPL1H3BU86 382 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 MATN3O15232 486 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 MAFKO60675 156 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 ME2P23368 584 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 CYP2C18P33260 490 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 RBBP5Q15291 538 aaKnown RBP25.57■■□□□ 1.68
C9orf40-201ENST00000376854 TIGD5Q53EQ6 642 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 ZNF470Q6ECI4 717 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 ARPINQ7Z6K5 226 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 TXNDC5Q8NBS9 432 aaKnown RBP25.57■■□□□ 1.68
C9orf40-201ENST00000376854 HEXDCQ8WVB3 486 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 MRPL57Q9BQC6 102 aaKnown RBP25.57■■□□□ 1.68
C9orf40-201ENST00000376854 RTP3Q9BQQ7 232 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 PAAF1Q9BRP4 392 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 FSD1LQ9BXM9 530 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 AP5M1Q9H0R1 490 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 MYADML2A6NDP7 307 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 TRPC5OSA6NMA1 111 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 PMPCBO75439 489 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 SNUPNO95149 360 aaKnown RBP25.57■■□□□ 1.68
C9orf40-201ENST00000376854 CD151P48509 253 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 ADGRE1Q14246 886 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 KDELC2Q7Z4H8 507 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 CCDC117Q8IWD4 279 aaPredicted RBP25.57■■□□□ 1.68
C9orf40-201ENST00000376854 C2CD4AQ8NCU7 369 aaPredicted RBP25.57■■□□□ 1.68
C9orf40-201ENST00000376854 PTCD2Q8WV60 388 aaKnown RBP25.57■■□□□ 1.68
C9orf40-201ENST00000376854 NPAS2Q99743 824 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 SLC39A8Q9C0K1 460 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 POMKQ9H5K3 350 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 ARHGEF38Q9NXL2 777 aa25.57■■□□□ 1.68
C9orf40-201ENST00000376854 A0A087X1B8 175 aa25.56■■□□□ 1.68
C9orf40-201ENST00000376854 DENRO43583 198 aaKnown RBP25.56■■□□□ 1.68
C9orf40-201ENST00000376854 PABPC4LP0CB38 370 aaKnown RBP25.56■■□□□ 1.68
C9orf40-201ENST00000376854 PAMP19021 973 aa25.56■■□□□ 1.68
C9orf40-201ENST00000376854 ADRA1AP35348 466 aa25.56■■□□□ 1.68
C9orf40-201ENST00000376854 SLC12A2P55011 1212 aa25.56■■□□□ 1.68
C9orf40-201ENST00000376854 RFTN1Q14699 578 aaPredicted RBP25.56■■□□□ 1.68
C9orf40-201ENST00000376854 TRIM67Q6ZTA4 783 aa25.56■■□□□ 1.68
C9orf40-201ENST00000376854 PIWIL4Q7Z3Z4 852 aaKnown RBP25.56■■□□□ 1.68
C9orf40-201ENST00000376854 C2orf69Q8N8R5 385 aa25.56■■□□□ 1.68
C9orf40-201ENST00000376854 MAELQ96JY0 434 aaKnown RBP25.56■■□□□ 1.68
C9orf40-201ENST00000376854 TRPV6Q9H1D0 765 aa25.56■■□□□ 1.68
C9orf40-201ENST00000376854 COPS7BQ9H9Q2 264 aaPredicted RBP25.56■■□□□ 1.68
C9orf40-201ENST00000376854 ENTPD7Q9NQZ7 604 aa25.56■■□□□ 1.68
C9orf40-201ENST00000376854 RIMS3Q9UJD0 308 aa25.56■■□□□ 1.68
C9orf40-201ENST00000376854 MRPL42Q9Y6G3 142 aaKnown RBP25.56■■□□□ 1.68
C9orf40-201ENST00000376854 TCAF2A6NFQ2 919 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 SDHDO14521 159 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 AP1G1O43747 822 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 SCNN1GP51170 649 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 ATXN3P54252 364 aaPredicted RBP25.55■■□□□ 1.68
C9orf40-201ENST00000376854 TMEM126BQ8IUX1 230 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 MARVELD2Q8N4S9 558 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 TMA16Q96EY4 203 aaKnown RBP25.55■■□□□ 1.68
C9orf40-201ENST00000376854 ATXN3LQ9H3M9 355 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 Q9H521 79 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 SUDS3Q9H7L9 328 aaPredicted RBP25.55■■□□□ 1.68
C9orf40-201ENST00000376854 MRM3Q9HC36 420 aaKnown RBP25.55■■□□□ 1.68
C9orf40-201ENST00000376854 TREX1Q9NSU2 369 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 GTSE1Q9NYZ3 720 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 FBXO5Q9UKT4 447 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 ARL5CA6NH57 179 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 IGLV3-25P01717 112 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 HLA-DQB2P05538 268 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 KPNA2P52292 529 aaKnown RBP25.55■■□□□ 1.68
C9orf40-201ENST00000376854 PURAQ00577 322 aaKnown RBP25.55■■□□□ 1.68
C9orf40-201ENST00000376854 SEPT6Q14141 434 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 FSCN1Q16658 493 aaKnown RBP25.55■■□□□ 1.68
C9orf40-201ENST00000376854 CEP70Q8NHQ1 597 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 NCSTNQ92542 709 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 KATNAL1Q9BW62 490 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 DMAP1Q9NPF5 467 aaPredicted RBP25.55■■□□□ 1.68
C9orf40-201ENST00000376854 RBM22Q9NW64 420 aaKnown RBP eCLIP25.55■■□□□ 1.68
C9orf40-201ENST00000376854 CLIC5Q9NZA1 410 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 ST3GAL5Q9UNP4 418 aa25.55■■□□□ 1.68
C9orf40-201ENST00000376854 DNAJA2O60884 412 aa25.54■■□□□ 1.68
C9orf40-201ENST00000376854 BCAS2O75934 225 aaPredicted RBP25.54■■□□□ 1.68
C9orf40-201ENST00000376854 HNRNPLP14866 589 aaKnown RBP eCLIP25.54■■□□□ 1.68
C9orf40-201ENST00000376854 ATP5F1P24539 256 aaPredicted RBP25.54■■□□□ 1.68
C9orf40-201ENST00000376854 CHRNA4P43681 627 aa25.54■■□□□ 1.68
C9orf40-201ENST00000376854 FKBP1BP68106 108 aa25.54■■□□□ 1.68
C9orf40-201ENST00000376854 CATSPER1Q8NEC5 780 aa25.54■■□□□ 1.68
C9orf40-201ENST00000376854 SCAMP5Q8TAC9 235 aa25.54■■□□□ 1.68
C9orf40-201ENST00000376854 DLG3Q92796 817 aa25.54■■□□□ 1.68
C9orf40-201ENST00000376854 HAPLN3Q96S86 360 aa25.54■■□□□ 1.68
C9orf40-201ENST00000376854 CATSPERBQ9H7T0 1116 aa25.54■■□□□ 1.68
C9orf40-201ENST00000376854 CHST12Q9NRB3 414 aa25.54■■□□□ 1.68
C9orf40-201ENST00000376854 NEMP2A6NFY4 417 aa25.54■■□□□ 1.68
C9orf40-201ENST00000376854 IRAK2O43187 625 aa25.54■■□□□ 1.68
C9orf40-201ENST00000376854 PAGE1O75459 146 aa25.54■■□□□ 1.68
C9orf40-201ENST00000376854 PMLP29590 882 aa25.54■■□□□ 1.68
C9orf40-201ENST00000376854 DNAJB13P59910 316 aa25.54■■□□□ 1.68
C9orf40-201ENST00000376854 POU4F1Q01851 419 aa25.54■■□□□ 1.68
C9orf40-201ENST00000376854 AP1ARQ63HQ0 302 aa25.54■■□□□ 1.68
C9orf40-201ENST00000376854 CNSTQ6PJW8 725 aa25.54■■□□□ 1.68
C9orf40-201ENST00000376854 LZTR1Q8N653 840 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms