RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 HOXB3P14651 431 aaPredicted RBP14.97□□□□□ -0.01
HDAC6-204ENST00000376643 EPHB2P29323 1055 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 ACVRL1P37023 503 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 BLKP51451 505 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 PCBP4P57723 403 aaKnown RBP14.97□□□□□ -0.01
HDAC6-204ENST00000376643 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
HDAC6-204ENST00000376643 ELP6Q0PNE2 266 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 PDE1CQ14123 709 aaPredicted RBP14.97□□□□□ -0.01
HDAC6-204ENST00000376643 FZD2Q14332 565 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 BROXQ5VW32 411 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 DNAJC24Q6P3W2 148 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 SASS6Q6UVJ0 657 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 GDPD4Q6W3E5 623 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 KDM7AQ6ZMT4 941 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 TMC6Q7Z403 805 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 TTC7BQ86TV6 843 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 ZNF248Q8NDW4 579 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 ATL2Q8NHH9 583 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 SLC30A5Q8TAD4 765 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 MAPK15Q8TD08 544 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 GPT2Q8TD30 523 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 HCAR2Q8TDS4 363 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 NAT6Q93015 286 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 BMFQ96LC9 184 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 GBP4Q96PP9 640 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 EIF3CQ99613 913 aaKnown RBP14.97□□□□□ -0.01
HDAC6-204ENST00000376643 NCAPGQ9BPX3 1015 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 SEPT11Q9NVA2 429 aaKnown RBP14.97□□□□□ -0.01
HDAC6-204ENST00000376643 ANO10Q9NW15 660 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 UCKL1Q9NWZ5 548 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 DKK3Q9UBP4 350 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 MFHAS1Q9Y4C4 1052 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 POM121BA6NF01 834 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 IGLON5A6NGN9 336 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 CAPN8A6NHC0 703 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 TMEM110-MUSTN1A8MSY1 372 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 LGALS16A8MUM7 142 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 LZTS3O60299 673 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-204ENST00000376643 TM7SF2O76062 418 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 DXOO77932 396 aaKnown RBP14.96□□□□□ -0.01
HDAC6-204ENST00000376643 TMCC1O94876 653 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 UGT2B4P06133 528 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 JUNDP17535 347 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 ZNF143P52747 638 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-204ENST00000376643 HDAC4P56524 1084 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 ERVPABLB-1P60509 514 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 PFN3P60673 137 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 RHOAP61586 193 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 MYL5Q02045 173 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 NR0B2Q15466 257 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 CLEC16AQ2KHT3 1053 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 CFAP58Q5T655 872 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 CDCP2Q5VXM1 449 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 CLEC17AQ6ZS10 378 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 SCG3Q8WXD2 468 aaKnown RBP14.96□□□□□ -0.01
HDAC6-204ENST00000376643 SLC13A1Q9BZW2 595 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 TTYH3Q9C0H2 523 aa14.96□□□□□ -0.01
HDAC6-204ENST00000376643 ARID1BQ8NFD5 2236 aaPredicted RBP14.96□□□□□ -0.02
HDAC6-204ENST00000376643 TRPM6Q9BX84 2022 aa14.95□□□□□ -0.02
HDAC6-204ENST00000376643 AREL1O15033 823 aa14.95□□□□□ -0.02
HDAC6-204ENST00000376643 TCEA3O75764 348 aa14.95□□□□□ -0.02
HDAC6-204ENST00000376643 CD160O95971 181 aa14.95□□□□□ -0.02
HDAC6-204ENST00000376643 CHRNB2P17787 502 aa14.95□□□□□ -0.02
HDAC6-204ENST00000376643 CDK11BP21127 795 aaKnown RBP14.95□□□□□ -0.02
HDAC6-204ENST00000376643 HTR1BP28222 390 aa14.95□□□□□ -0.02
HDAC6-204ENST00000376643 RFC1P35251 1148 aaPredicted RBP14.95□□□□□ -0.02
HDAC6-204ENST00000376643 ANP32AP39687 249 aaKnown RBP14.95□□□□□ -0.02
HDAC6-204ENST00000376643 FGL2Q14314 439 aa14.95□□□□□ -0.02
HDAC6-204ENST00000376643 ARTNQ5T4W7 220 aa14.95□□□□□ -0.02
HDAC6-204ENST00000376643 ERAP2Q6P179 960 aa14.95□□□□□ -0.02
HDAC6-204ENST00000376643 DCUN1D2Q6PH85 259 aa14.95□□□□□ -0.02
HDAC6-204ENST00000376643 SDR16C5Q8N3Y7 309 aa14.95□□□□□ -0.02
HDAC6-204ENST00000376643 FSTL5Q8N475 847 aaPredicted RBP14.95□□□□□ -0.02
HDAC6-204ENST00000376643 JOSD2Q8TAC2 188 aa14.95□□□□□ -0.02
HDAC6-204ENST00000376643 IFI44Q8TCB0 444 aa14.95□□□□□ -0.02
HDAC6-204ENST00000376643 CCDC97Q96F63 343 aaPredicted RBP14.95□□□□□ -0.02
HDAC6-204ENST00000376643 KLHL32Q96NJ5 620 aa14.95□□□□□ -0.02
HDAC6-204ENST00000376643 LGMNQ99538 433 aa14.95□□□□□ -0.02
HDAC6-204ENST00000376643 KLF6Q99612 283 aaPredicted RBP14.95□□□□□ -0.02
HDAC6-204ENST00000376643 CNPY3Q9BT09 278 aa14.95□□□□□ -0.02
HDAC6-204ENST00000376643 CPEB1Q9BZB8 566 aaKnown RBP14.95□□□□□ -0.02
HDAC6-204ENST00000376643 THSD1Q9NS62 852 aa14.95□□□□□ -0.02
HDAC6-204ENST00000376643 APOBEC3BQ9UH17 382 aaKnown RBP14.95□□□□□ -0.02
HDAC6-204ENST00000376643 SIK3Q9Y2K2 1263 aa14.95□□□□□ -0.02
HDAC6-204ENST00000376643 TEX51A0A1B0GUA7 166 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 WASH4PA8MWX3 477 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 TLX3O43711 291 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-204ENST00000376643 ANXA6P08133 673 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 FERP16591 822 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 MLLT3P42568 568 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-204ENST00000376643 ABL2P42684 1182 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 LSSP48449 732 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 PEX5P50542 639 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 ZNF135P52742 658 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-204ENST00000376643 COPB1P53618 953 aaKnown RBP14.94□□□□□ -0.02
HDAC6-204ENST00000376643 CLDN6P56747 220 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 UBXN1Q04323 297 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 STX1AQ16623 288 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 ESRP1Q6NXG1 681 aaKnown RBP14.94□□□□□ -0.02
HDAC6-204ENST00000376643 SCYL2Q6P3W7 929 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms