RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 SCAMP5Q8TAC9 235 aa15.77■□□□□ 0.11
CCDC40-202ENST00000374876 SPATA17Q96L03 361 aa15.77■□□□□ 0.11
CCDC40-202ENST00000374876 CPNE1Q99829 537 aa15.77■□□□□ 0.11
CCDC40-202ENST00000374876 GORASP1Q9BQQ3 440 aa15.77■□□□□ 0.11
CCDC40-202ENST00000374876 BTBD10Q9BSF8 475 aa15.77■□□□□ 0.11
CCDC40-202ENST00000374876 WWP1Q9H0M0 922 aa15.77■□□□□ 0.11
CCDC40-202ENST00000374876 ZNF395Q9H8N7 513 aaPredicted RBP15.77■□□□□ 0.11
CCDC40-202ENST00000374876 EBF2Q9HAK2 575 aa15.77■□□□□ 0.11
CCDC40-202ENST00000374876 DMAP1Q9NPF5 467 aaPredicted RBP15.77■□□□□ 0.11
CCDC40-202ENST00000374876 THAP1Q9NVV9 213 aa15.77■□□□□ 0.11
CCDC40-202ENST00000374876 A0A1W2PRU2 124 aa15.76■□□□□ 0.11
CCDC40-202ENST00000374876 LRIG2O94898 1065 aa15.76■□□□□ 0.11
CCDC40-202ENST00000374876 KITP10721 976 aa15.76■□□□□ 0.11
CCDC40-202ENST00000374876 ESRRAP11474 423 aaPredicted RBP15.76■□□□□ 0.11
CCDC40-202ENST00000374876 GABRR2P28476 465 aa15.76■□□□□ 0.11
CCDC40-202ENST00000374876 PRSS36Q5K4E3 855 aa15.76■□□□□ 0.11
CCDC40-202ENST00000374876 GRTP1Q5TC63 336 aa15.76■□□□□ 0.11
CCDC40-202ENST00000374876 C16orf46Q6P387 395 aa15.76■□□□□ 0.11
CCDC40-202ENST00000374876 ZCCHC23Q6ZST2 131 aa15.76■□□□□ 0.11
CCDC40-202ENST00000374876 ALYREFQ86V81 257 aaKnown RBP15.76■□□□□ 0.11
CCDC40-202ENST00000374876 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.76■□□□□ 0.11
CCDC40-202ENST00000374876 ZNF669Q96BR6 464 aaPredicted RBP15.76■□□□□ 0.11
CCDC40-202ENST00000374876 PRR11Q96HE9 360 aaPredicted RBP15.76■□□□□ 0.11
CCDC40-202ENST00000374876 MYADMQ96S97 322 aa15.76■□□□□ 0.11
CCDC40-202ENST00000374876 VAT1Q99536 393 aa15.76■□□□□ 0.11
CCDC40-202ENST00000374876 TRIM62Q9BVG3 475 aa15.76■□□□□ 0.11
CCDC40-202ENST00000374876 MARCOQ9UEW3 520 aaPredicted RBP15.76■□□□□ 0.11
CCDC40-202ENST00000374876 C2CD4DB7Z1M9 353 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 MOSPD3O75425 235 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 TYK2P29597 1187 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 EPHA5P54756 1037 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 AQP5P55064 265 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 CDK18Q07002 472 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 ZBTB17Q13105 803 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 TTC7BQ86TV6 843 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 FCRL3Q96P31 734 aaPredicted RBP15.75■□□□□ 0.11
CCDC40-202ENST00000374876 TACO1Q9BSH4 297 aaKnown RBP15.75■□□□□ 0.11
CCDC40-202ENST00000374876 NMUR2Q9GZQ4 415 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 ATXN3LQ9H3M9 355 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 IL21Q9HBE4 155 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 CASS4Q9NQ75 786 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 EMCNQ9ULC0 261 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 HBS1LQ9Y450 684 aaKnown RBP15.75■□□□□ 0.11
CCDC40-202ENST00000374876 ARHGAP42A6NI28 874 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 TNFRSF10BO14763 440 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 GYG2O15488 501 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 PLIN3O60664 434 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 CEBPBP17676 345 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 NFKB1P19838 968 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 CD68P34810 354 aaPredicted RBP15.75■□□□□ 0.11
CCDC40-202ENST00000374876 TEAD2Q15562 447 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 ACCSLQ4AC99 568 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 KCTD11Q693B1 232 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 RWDD4Q6NW29 188 aaKnown RBP15.75■□□□□ 0.11
CCDC40-202ENST00000374876 TMEM150AQ86TG1 271 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 TMEM135Q86UB9 458 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 NUP93Q8N1F7 819 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.75■□□□□ 0.11
CCDC40-202ENST00000374876 SHKBP1Q8TBC3 707 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 DQX1Q8TE96 717 aaKnown RBP15.75■□□□□ 0.11
CCDC40-202ENST00000374876 FGF13Q92913 245 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 MIPEPQ99797 713 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.75■□□□□ 0.11
CCDC40-202ENST00000374876 ARMCX1Q9P291 453 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 PPARGC1AQ9UBK2 798 aaKnown RBP15.75■□□□□ 0.11
CCDC40-202ENST00000374876 MCM8Q9UJA3 840 aa15.75■□□□□ 0.11
CCDC40-202ENST00000374876 RPL26L1Q9UNX3 145 aaKnown RBP15.75■□□□□ 0.11
CCDC40-202ENST00000374876 ZNF197O14709 1029 aa15.74■□□□□ 0.11
CCDC40-202ENST00000374876 USP1O94782 785 aa15.74■□□□□ 0.11
CCDC40-202ENST00000374876 F11P03951 625 aa15.74■□□□□ 0.11
CCDC40-202ENST00000374876 SPRP35270 261 aaPredicted RBP15.74■□□□□ 0.11
CCDC40-202ENST00000374876 SLC5A3P53794 718 aa15.74■□□□□ 0.11
CCDC40-202ENST00000374876 COG7P83436 770 aa15.74■□□□□ 0.11
CCDC40-202ENST00000374876 CYP4F8P98187 520 aa15.74■□□□□ 0.11
CCDC40-202ENST00000374876 ZP2Q05996 745 aa15.74■□□□□ 0.11
CCDC40-202ENST00000374876 PRPSAP1Q14558 356 aa15.74■□□□□ 0.11
CCDC40-202ENST00000374876 INSCQ1MX18 579 aa15.74■□□□□ 0.11
CCDC40-202ENST00000374876 WASHC2DQ5SRD0 308 aa15.74■□□□□ 0.11
CCDC40-202ENST00000374876 FAM91A1Q658Y4 838 aa15.74■□□□□ 0.11
CCDC40-202ENST00000374876 MBLAC2Q68D91 279 aa15.74■□□□□ 0.11
CCDC40-202ENST00000374876 ADHFE1Q8IWW8 467 aa15.74■□□□□ 0.11
CCDC40-202ENST00000374876 SCML4Q8N228 414 aa15.74■□□□□ 0.11
CCDC40-202ENST00000374876 CELF6Q96J87 481 aaKnown RBP15.74■□□□□ 0.11
CCDC40-202ENST00000374876 MLPHQ9BV36 600 aaPredicted RBP15.74■□□□□ 0.11
CCDC40-202ENST00000374876 CADM1Q9BY67 442 aaKnown RBP15.74■□□□□ 0.11
CCDC40-202ENST00000374876 C20orf27Q9GZN8 174 aa15.74■□□□□ 0.11
CCDC40-202ENST00000374876 C15orf41Q9Y2V0 281 aa15.74■□□□□ 0.11
CCDC40-202ENST00000374876 GREB1Q4ZG55 1949 aa15.74■□□□□ 0.11
CCDC40-202ENST00000374876 MAGEB16A2A368 324 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 ATP9BO43861 1147 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 GSRP00390 522 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 JCHAINP01591 159 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 KCNA4P22459 653 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 NPY2RP49146 381 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 ANKRD20A4Q4UJ75 823 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 PPM1JQ5JR12 505 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 OTOP3Q7RTS5 596 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 STRA8Q7Z7C7 330 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 NPAS3Q8IXF0 933 aa15.73■□□□□ 0.11
CCDC40-202ENST00000374876 GIMAP7Q8NHV1 300 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms