RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 SHROOM3Q8TF72 1996 aa12.24□□□□□ -0.45
HMGCL-202ENST00000374487 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.23□□□□□ -0.45
HMGCL-202ENST00000374487 CAPN14A8MX76 684 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 B2RBV5 119 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 C5orf67F2Z3F1 127 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 FGF18O76093 207 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 CPB1P15086 417 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 PAMP19021 973 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 CPA2P48052 419 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 RENBPP51606 427 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 KDSRQ06136 332 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 THOC5Q13769 683 aaKnown RBP12.23□□□□□ -0.45
HMGCL-202ENST00000374487 PCSK7Q16549 785 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 AFMIDQ63HM1 303 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 DENND5AQ6IQ26 1287 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 ZNF280DQ6N043 979 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 MSANTD2Q6P1R3 559 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 ZC3HC1Q86WB0 502 aaKnown RBP12.23□□□□□ -0.45
HMGCL-202ENST00000374487 ARHGAP24Q8N264 748 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 LRRC43Q8N309 656 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 ATP6V0D2Q8N8Y2 350 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 POF1BQ8WVV4 589 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 FBXO32Q969P5 355 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 SLC39A13Q96H72 371 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 ATXN3LQ9H3M9 355 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 DENND2DQ9H6A0 471 aaPredicted RBP12.23□□□□□ -0.45
HMGCL-202ENST00000374487 TASP1Q9H6P5 420 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 EBF2Q9HAK2 575 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 RNPEPL1Q9HAU8 725 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 FNIP2Q9P278 1114 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 CPSF2Q9P2I0 782 aaKnown RBP12.23□□□□□ -0.45
HMGCL-202ENST00000374487 MYO7AQ13402 2215 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 WASH4PA8MWX3 477 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 SPECC1L-ADORA2AF8WAN1 911 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 ENTPD5O75356 428 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 HSPA4LO95757 839 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 ALDH2P05091 517 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 GALTP07902 379 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 RHOQP17081 205 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 MAGEA11P43364 429 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 SEPT6Q14141 434 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 PSMD5Q16401 504 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 ACCSLQ4AC99 568 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 MS4A13Q5J8X5 152 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 CFAP157Q5JU67 520 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 ESRP1Q6NXG1 681 aaKnown RBP12.23□□□□□ -0.45
HMGCL-202ENST00000374487 ADGRD2Q7Z7M1 963 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 TREML1Q86YW5 311 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 UMODL1-AS1Q8N2C9 162 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 TTC9BQ8N6N2 239 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 ACVR1CQ8NER5 493 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 NSMCE1Q8WV22 266 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 PTCD2Q8WV60 388 aaKnown RBP12.23□□□□□ -0.45
HMGCL-202ENST00000374487 AUTS2Q8WXX7 1259 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 PABPC5Q96DU9 382 aaKnown RBP12.23□□□□□ -0.45
HMGCL-202ENST00000374487 B3GALT6Q96L58 329 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 GPR22Q99680 433 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 VN1R3Q9BXE9 311 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 PNPOQ9NVS9 261 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 TAGLN3Q9UI15 199 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 MID2Q9UJV3 735 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 SORCS3Q9UPU3 1222 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 ANKRD6Q9Y2G4 727 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 SLC27A5Q9Y2P5 690 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 TCAF1Q9Y4C2 921 aa12.23□□□□□ -0.45
HMGCL-202ENST00000374487 OR6C75A6NL08 312 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 HOXA2O43364 376 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 SOAT2O75908 522 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 TBX18O95935 607 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 AHSGP02765 367 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 APOA4P06727 396 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 ADRA1AP35348 466 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 HARS2P49590 506 aaKnown RBP12.22□□□□□ -0.45
HMGCL-202ENST00000374487 NDST2P52849 883 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 MXRA7P84157 204 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 CTBP1Q13363 440 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 HNRNPDQ14103 355 aaKnown RBP12.22□□□□□ -0.45
HMGCL-202ENST00000374487 CNGA3Q16281 694 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 MGAT5BQ3V5L5 792 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 C10orf120Q5SQS8 335 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 MARC1Q5VT66 337 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 RANBP10Q6VN20 620 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 CLEC14AQ86T13 490 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 RBM23Q86U06 439 aaKnown RBP12.22□□□□□ -0.45
HMGCL-202ENST00000374487 TMPRSS6Q8IU80 811 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 CCDC117Q8IWD4 279 aaPredicted RBP12.22□□□□□ -0.45
HMGCL-202ENST00000374487 SCYL1Q96KG9 808 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 BTN2A3PQ96KV6 586 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 SORT1Q99523 831 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 SEPT5Q99719 369 aaPredicted RBP12.22□□□□□ -0.45
HMGCL-202ENST00000374487 MCMBPQ9BTE3 642 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 CCDC106Q9BWC9 280 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 NT5MQ9NPB1 228 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 TLR8Q9NR97 1041 aaKnown RBP12.22□□□□□ -0.45
HMGCL-202ENST00000374487 OLA1Q9NTK5 396 aaKnown RBP12.22□□□□□ -0.45
HMGCL-202ENST00000374487 MARCH2Q9P0N8 246 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 CDY1Q9Y6F8 540 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 PLXNA4Q9HCM2 1894 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 PRR5-ARHGAP8B1AHC4 643 aa12.22□□□□□ -0.45
HMGCL-202ENST00000374487 G3V2L1 256 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms