RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 KLHL23Q8NBE8 558 aa13.45□□□□□ -0.26
A1CF-204ENST00000373997 ECSITQ9BQ95 431 aa13.45□□□□□ -0.26
A1CF-204ENST00000373997 FERMT1Q9BQL6 677 aa13.45□□□□□ -0.26
A1CF-204ENST00000373997 EBF4Q9BQW3 602 aa13.45□□□□□ -0.26
A1CF-204ENST00000373997 ZBP1Q9H171 429 aa13.45□□□□□ -0.26
A1CF-204ENST00000373997 CATSPERBQ9H7T0 1116 aa13.45□□□□□ -0.26
A1CF-204ENST00000373997 DNAJC28Q9NX36 388 aa13.45□□□□□ -0.26
A1CF-204ENST00000373997 DNAJC16Q9Y2G8 782 aa13.45□□□□□ -0.26
A1CF-204ENST00000373997 INSL6Q9Y581 213 aa13.45□□□□□ -0.26
A1CF-204ENST00000373997 A0A088AWK7 358 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 LCHNA4D1U4 455 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 FGF10O15520 208 aaPredicted RBP13.44□□□□□ -0.26
A1CF-204ENST00000373997 CCNT2O60583 730 aaKnown RBP13.44□□□□□ -0.26
A1CF-204ENST00000373997 PLIN3O60664 434 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 FGF3P11487 239 aaPredicted RBP13.44□□□□□ -0.26
A1CF-204ENST00000373997 ALOX15P16050 662 aaPredicted RBP13.44□□□□□ -0.26
A1CF-204ENST00000373997 HMGA1P17096 107 aaKnown RBP13.44□□□□□ -0.26
A1CF-204ENST00000373997 HOXC13P31276 330 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 SLC1A6P48664 564 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 ROR2Q01974 943 aaKnown RBP13.44□□□□□ -0.26
A1CF-204ENST00000373997 GALNT2Q10471 571 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 UBAP2LQ14157 1087 aaKnown RBP13.44□□□□□ -0.26
A1CF-204ENST00000373997 VEPH1Q14D04 833 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 MS4A13Q5J8X5 152 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 N4BP2L1Q5TBK1 243 aaPredicted RBP13.44□□□□□ -0.26
A1CF-204ENST00000373997 RAP1GAP2Q684P5 730 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 LRRC8BQ6P9F7 803 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 IZUMO2Q6UXV1 221 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 PACS1Q6VY07 963 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 ZCCHC23Q6ZST2 131 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 GALNT15Q8N3T1 639 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 PDZD8Q8NEN9 1154 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 PPP4R1Q8TF05 950 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 JADE3Q92613 823 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 CLPTM1LQ96KA5 538 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 EMCNQ9ULC0 261 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 INSL5Q9Y5Q6 135 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 RAD54BQ9Y620 910 aa13.44□□□□□ -0.26
A1CF-204ENST00000373997 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.43□□□□□ -0.26
A1CF-204ENST00000373997 TLL1O43897 1013 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 MX2P20592 715 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 GARSP41250 739 aaKnown RBP13.43□□□□□ -0.26
A1CF-204ENST00000373997 COPAP53621 1224 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 PPIDQ08752 370 aaKnown RBP13.43□□□□□ -0.26
A1CF-204ENST00000373997 ARTNQ5T4W7 220 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 HERC6Q8IVU3 1022 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 ZNF567Q8N184 647 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 PPP2R3CQ969Q6 453 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 HDAC11Q96DB2 347 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 BTN2A3PQ96KV6 586 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 CEP295NLQ96MC4 621 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 LBHD1Q9BQE6 289 aaPredicted RBP13.43□□□□□ -0.26
A1CF-204ENST00000373997 VCX3BQ9H321 246 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 S100A14Q9HCY8 104 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 NDFIP2Q9NV92 336 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 ZDHHC7Q9NXF8 308 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 KLHL8Q9P2G9 620 aaPredicted RBP13.43□□□□□ -0.26
A1CF-204ENST00000373997 HSFX1Q9UBD0 423 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 SLC4A7Q9Y6M7 1214 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 MYO7AQ13402 2215 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 MYLKQ15746 1914 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 ZNF840PA6NDX5 716 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 NCAM2O15394 837 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 OPHN1O60890 802 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 IGLV3-27P01718 113 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 ALDOAP04075 364 aaKnown RBP13.43□□□□□ -0.26
A1CF-204ENST00000373997 LYNP07948 512 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 CNPP09543 421 aaKnown RBP13.43□□□□□ -0.26
A1CF-204ENST00000373997 CTSAP10619 480 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 PGAM1P18669 254 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 PTPN3P26045 913 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 PSMB4P28070 264 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 HTR7P34969 479 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 CTNNB1P35222 781 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 ATP5C1P36542 298 aaKnown RBP13.43□□□□□ -0.26
A1CF-204ENST00000373997 KCNQ1P51787 676 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 MLLT6P55198 1093 aaPredicted RBP13.43□□□□□ -0.26
A1CF-204ENST00000373997 XIAPP98170 497 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 HNRNPDQ14103 355 aaKnown RBP13.43□□□□□ -0.26
A1CF-204ENST00000373997 CWF19L1Q69YN2 538 aaKnown RBP13.43□□□□□ -0.26
A1CF-204ENST00000373997 ARHGAP36Q6ZRI8 547 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 TFAP2DQ7Z6R9 452 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 ZNF778Q96MU6 729 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 TRIM56Q9BRZ2 755 aaKnown RBP13.43□□□□□ -0.26
A1CF-204ENST00000373997 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.43□□□□□ -0.26
A1CF-204ENST00000373997 IL1RAPL1Q9NZN1 696 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 TRPM5Q9NZQ8 1165 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 DNMT3LQ9UJW3 386 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 CHD5Q8TDI0 1954 aa13.43□□□□□ -0.26
A1CF-204ENST00000373997 HELZP42694 1942 aaKnown RBP13.42□□□□□ -0.26
A1CF-204ENST00000373997 TPP1O14773 563 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 ITM2AO43736 263 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 ZNF189O75820 626 aaPredicted RBP13.42□□□□□ -0.26
A1CF-204ENST00000373997 GRIA1P42261 906 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 NRG1Q02297 640 aaPredicted RBP13.42□□□□□ -0.26
A1CF-204ENST00000373997 BTKQ06187 659 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 CDC16Q13042 620 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 PDE1CQ14123 709 aaPredicted RBP13.42□□□□□ -0.26
A1CF-204ENST00000373997 PCLAFQ15004 111 aa13.42□□□□□ -0.26
A1CF-204ENST00000373997 HECTD3Q5T447 861 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms