RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 TMEM215Q68D42 235 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 CXorf57Q6NSI4 855 aaKnown RBP20.81■□□□□ 0.92
SYNC-201ENST00000373484 PSTKQ8IV42 348 aaKnown RBP20.81■□□□□ 0.92
SYNC-201ENST00000373484 AHI1Q8N157 1196 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 SPEM1Q8N4L4 309 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 KCNV2Q8TDN2 545 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 ZYG11BQ9C0D3 744 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 GPATCH2LQ9NWQ4 482 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 MPP6Q9NZW5 540 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 WDFY4Q6ZS81 3184 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 RASA4BC9J798 803 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 RASA4O43374 803 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 DIAPH2O60879 1101 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 IL1R2P27930 398 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 MAGEA4P43358 317 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 IRX1P78414 480 aaPredicted RBP20.81■□□□□ 0.92
SYNC-201ENST00000373484 SLC25A11Q02978 314 aaKnown RBP20.81■□□□□ 0.92
SYNC-201ENST00000373484 MGAT5Q09328 741 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 SNX1Q13596 522 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 PDK4Q16654 411 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 C2orf27AQ580R0 203 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 IZUMO3Q5VZ72 239 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 CPNE8Q86YQ8 564 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 SRRM1Q8IYB3 904 aaKnown RBP20.81■□□□□ 0.92
SYNC-201ENST00000373484 CYP4X1Q8N118 509 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 GDAP1Q8TB36 358 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 THOC1Q96FV9 657 aaKnown RBP20.81■□□□□ 0.92
SYNC-201ENST00000373484 ZNF570Q96NI8 536 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 KIAA1522Q9P206 1035 aaPredicted RBP20.81■□□□□ 0.92
SYNC-201ENST00000373484 ZNF212Q9UDV6 495 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 SLC24A2Q9UI40 661 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 TBC1D30Q9Y2I9 924 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 LRRC42Q9Y546 428 aa20.81■□□□□ 0.92
SYNC-201ENST00000373484 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.8■□□□□ 0.92
SYNC-201ENST00000373484 CLGNO14967 610 aa20.8■□□□□ 0.92
SYNC-201ENST00000373484 ATG13O75143 517 aa20.8■□□□□ 0.92
SYNC-201ENST00000373484 CALRP27797 417 aaKnown RBP20.8■□□□□ 0.92
SYNC-201ENST00000373484 TIE1P35590 1138 aa20.8■□□□□ 0.92
SYNC-201ENST00000373484 ZNF177Q13360 481 aaPredicted RBP20.8■□□□□ 0.92
SYNC-201ENST00000373484 BLMHQ13867 455 aa20.8■□□□□ 0.92
SYNC-201ENST00000373484 CA9Q16790 459 aa20.8■□□□□ 0.92
SYNC-201ENST00000373484 ADIPOR2Q86V24 386 aa20.8■□□□□ 0.92
SYNC-201ENST00000373484 ZNF513Q8N8E2 541 aaPredicted RBP20.8■□□□□ 0.92
SYNC-201ENST00000373484 OSBPL8Q9BZF1 889 aa20.8■□□□□ 0.92
SYNC-201ENST00000373484 ETNK1Q9HBU6 452 aa20.8■□□□□ 0.92
SYNC-201ENST00000373484 SPATA6Q9NWH7 488 aaPredicted RBP20.8■□□□□ 0.92
SYNC-201ENST00000373484 ELOVL2Q9NXB9 296 aa20.8■□□□□ 0.92
SYNC-201ENST00000373484 INTS6Q9UL03 887 aaKnown RBP20.8■□□□□ 0.92
SYNC-201ENST00000373484 LMNAP02545 664 aaKnown RBP20.79■□□□□ 0.92
SYNC-201ENST00000373484 HOXC13P31276 330 aa20.79■□□□□ 0.92
SYNC-201ENST00000373484 FOXN2P32314 431 aa20.79■□□□□ 0.92
SYNC-201ENST00000373484 OXCT1P55809 520 aa20.79■□□□□ 0.92
SYNC-201ENST00000373484 WDR4P57081 412 aaKnown RBP20.79■□□□□ 0.92
SYNC-201ENST00000373484 SLC12A1Q13621 1099 aa20.79■□□□□ 0.92
SYNC-201ENST00000373484 FUT11Q495W5 492 aa20.79■□□□□ 0.92
SYNC-201ENST00000373484 HSF5Q4G112 596 aaPredicted RBP20.79■□□□□ 0.92
SYNC-201ENST00000373484 BOLA3Q53S33 107 aa20.79■□□□□ 0.92
SYNC-201ENST00000373484 ANKRD20A2Q5SQ80 823 aa20.79■□□□□ 0.92
SYNC-201ENST00000373484 ANKRD20A1Q5TYW2 823 aa20.79■□□□□ 0.92
SYNC-201ENST00000373484 ANKRD20A3Q5VUR7 823 aa20.79■□□□□ 0.92
SYNC-201ENST00000373484 EGFLAMQ63HQ2 1017 aa20.79■□□□□ 0.92
SYNC-201ENST00000373484 C1orf210Q8IVY1 113 aa20.79■□□□□ 0.92
SYNC-201ENST00000373484 ENDOVQ8N8Q3 282 aaKnown RBP20.79■□□□□ 0.92
SYNC-201ENST00000373484 IL17RCQ8NAC3 791 aa20.79■□□□□ 0.92
SYNC-201ENST00000373484 LRRC37BQ96QE4 947 aa20.79■□□□□ 0.92
SYNC-201ENST00000373484 EPAS1Q99814 870 aa20.79■□□□□ 0.92
SYNC-201ENST00000373484 DHX35Q9H5Z1 703 aaKnown RBP20.79■□□□□ 0.92
SYNC-201ENST00000373484 RETREG1Q9H6L5 497 aa20.79■□□□□ 0.92
SYNC-201ENST00000373484 RNPEPL1Q9HAU8 725 aa20.79■□□□□ 0.92
SYNC-201ENST00000373484 SAR1AQ9NR31 198 aa20.79■□□□□ 0.92
SYNC-201ENST00000373484 DRG1Q9Y295 367 aaKnown RBP20.79■□□□□ 0.92
SYNC-201ENST00000373484 TIMM44O43615 452 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 HNRNPLP14866 589 aaKnown RBP eCLIP20.78■□□□□ 0.92
SYNC-201ENST00000373484 PTPN7P35236 360 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 CKAP5Q14008 2032 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 DMC1Q14565 340 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 MBLAC2Q68D91 279 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 TXNRD3NBQ6F5E7 133 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 RWDD4Q6NW29 188 aaKnown RBP20.78■□□□□ 0.92
SYNC-201ENST00000373484 TFAP2DQ7Z6R9 452 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 SETD3Q86TU7 594 aaPredicted RBP20.78■□□□□ 0.92
SYNC-201ENST00000373484 ALLCQ8N6M5 410 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 OR52K2Q8NGK3 314 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 UCMAQ8WVF2 138 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 TEKT4Q8WW24 435 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 ATG4AQ8WYN0 398 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 ACDQ96AP0 544 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 RBM15Q96T37 977 aaKnown RBP eCLIP20.78■□□□□ 0.92
SYNC-201ENST00000373484 TUBB6Q9BUF5 446 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 CIPCQ9C0C6 399 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 ZWILCHQ9H900 591 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 ZDHHC4Q9NPG8 344 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 C2orf42Q9NWW7 574 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 GALR2O43603 387 aaPredicted RBP20.78■□□□□ 0.92
SYNC-201ENST00000373484 CREB3O43889 395 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 EDF1O60869 148 aaKnown RBP20.78■□□□□ 0.92
SYNC-201ENST00000373484 RHOQP17081 205 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 GNAZP19086 355 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 CALB2P22676 271 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 HTR7P34969 479 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms