RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 DEPDC4Q8N2C3 294 aa10.71□□□□□ -0.69
PGK1-201ENST00000373316 ALG3Q92685 438 aa10.71□□□□□ -0.69
PGK1-201ENST00000373316 TIFAQ96CG3 184 aa10.71□□□□□ -0.69
PGK1-201ENST00000373316 PTPN18Q99952 460 aa10.71□□□□□ -0.69
PGK1-201ENST00000373316 MCM8Q9UJA3 840 aa10.71□□□□□ -0.69
PGK1-201ENST00000373316 OTOFQ9HC10 1997 aa10.71□□□□□ -0.7
PGK1-201ENST00000373316 A0A0G2JLL6 359 aaPredicted RBP10.71□□□□□ -0.7
PGK1-201ENST00000373316 DCDC2CA8MYV0 355 aa10.71□□□□□ -0.7
PGK1-201ENST00000373316 BTBD19C9JJ37 291 aa10.71□□□□□ -0.7
PGK1-201ENST00000373316 TM7SF2O76062 418 aa10.71□□□□□ -0.7
PGK1-201ENST00000373316 HCAR3P49019 387 aa10.71□□□□□ -0.7
PGK1-201ENST00000373316 YBEYP58557 167 aaPredicted RBP10.71□□□□□ -0.7
PGK1-201ENST00000373316 BST1Q10588 318 aa10.71□□□□□ -0.7
PGK1-201ENST00000373316 PARP15Q460N3 678 aa10.71□□□□□ -0.7
PGK1-201ENST00000373316 PRRT2Q7Z6L0 340 aaPredicted RBP10.71□□□□□ -0.7
PGK1-201ENST00000373316 TMEM126BQ8IUX1 230 aa10.71□□□□□ -0.7
PGK1-201ENST00000373316 AGAP11Q8TF27 550 aa10.71□□□□□ -0.7
PGK1-201ENST00000373316 TOP1MTQ969P6 601 aa10.71□□□□□ -0.7
PGK1-201ENST00000373316 TRIM63Q969Q1 353 aa10.71□□□□□ -0.7
PGK1-201ENST00000373316 ROPN1LQ96C74 230 aa10.71□□□□□ -0.7
PGK1-201ENST00000373316 TCF12Q99081 682 aa10.71□□□□□ -0.7
PGK1-201ENST00000373316 PNPLA8Q9NP80 782 aa10.71□□□□□ -0.7
PGK1-201ENST00000373316 RLFQ13129 1914 aa10.71□□□□□ -0.7
PGK1-201ENST00000373316 TCRBV9S1A1TA0A576 114 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 RNASEH1O60930 286 aaKnown RBP10.7□□□□□ -0.7
PGK1-201ENST00000373316 MED26O95402 600 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 OGNP20774 298 aaKnown RBP10.7□□□□□ -0.7
PGK1-201ENST00000373316 PPP3CCP48454 512 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 NR6A1Q15406 480 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 LRRC36Q1X8D7 754 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 HSDL1Q3SXM5 330 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 ABRAXAS1Q6UWZ7 409 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 VSTM1Q6UX27 236 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 IFNEQ86WN2 208 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 ZDHHC13Q8IUH4 622 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 FBXW8Q8N3Y1 598 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 FBXL18Q96ME1 805 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 Q96MT0 163 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 SPATA5L1Q9BVQ7 753 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 APOL5Q9BWW9 433 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 TKTL2Q9H0I9 626 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 MID1IP1Q9NPA3 183 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 SIX2Q9NPC8 291 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 DMTF1Q9Y222 760 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 PHIPQ8WWQ0 1821 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 SF3B1O75533 1304 aaKnown RBP eCLIP10.7□□□□□ -0.75e-7■■■■■ 34.9
PGK1-201ENST00000373316 SGTAO43765 313 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 DGKIO75912 1065 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 RECQL4O94761 1208 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 CTSHP09668 335 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 ADORA2AP29274 412 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 SKP1P63208 163 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 ARMC12Q5T9G4 340 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 BROXQ5VW32 411 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 ERICH5Q6P6B1 374 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 NEK10Q6ZWH5 1172 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 MILR1Q7Z6M3 343 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 GPSM1Q86YR5 675 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 TBC1D21Q8IYX1 336 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 C8orf59Q8N0T1 100 aaPredicted RBP10.7□□□□□ -0.7
PGK1-201ENST00000373316 USP6NLQ92738 828 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 KAT2BQ92831 832 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 PHF21AQ96BD5 680 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 NUSAP1Q9BXS6 441 aaKnown RBP10.7□□□□□ -0.7
PGK1-201ENST00000373316 PCDH10Q9P2E7 1040 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 OR12D3Q9UGF7 316 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 C3orf18Q9UK00 162 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 SLC45A1Q9Y2W3 748 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 OTCP00480 354 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 MAGEA10P43363 369 aaPredicted RBP10.7□□□□□ -0.7
PGK1-201ENST00000373316 PTDSS1P48651 473 aaKnown RBP10.7□□□□□ -0.7
PGK1-201ENST00000373316 MRPS15P82914 257 aaKnown RBP10.7□□□□□ -0.7
PGK1-201ENST00000373316 EFEMP1Q12805 493 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 ZC3H12AQ5D1E8 599 aaKnown RBP10.7□□□□□ -0.7
PGK1-201ENST00000373316 OTOAQ7RTW8 1153 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 OOSP2Q86WS3 158 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 BRI3BPQ8WY22 251 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 MIEF2Q96C03 454 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 CDRT15Q96T59 188 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 PCDHB18PQ96TA0 734 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 ULBP1Q9BZM6 244 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 PLGRKTQ9HBL7 147 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 PLK2Q9NYY3 685 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 IGSF9Q9P2J2 1179 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 DICER1Q9UPY3 1922 aaKnown RBP10.7□□□□□ -0.7
PGK1-201ENST00000373316 TK2O00142 265 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 ALOX5P09917 674 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 YY1P25490 414 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 CHKAP35790 457 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 PSME3P61289 254 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 TSNQ15631 228 aaKnown RBP10.7□□□□□ -0.7
PGK1-201ENST00000373316 INO80DQ53TQ3 878 aaPredicted RBP10.7□□□□□ -0.7
PGK1-201ENST00000373316 ZNF549Q6P9A3 640 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 USP45Q70EL2 814 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 GLT6D1Q7Z4J2 308 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 MPP5Q8N3R9 675 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 CHCHD4Q8N4Q1 142 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 CD101Q93033 1021 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 OSMRQ99650 979 aa10.7□□□□□ -0.7
PGK1-201ENST00000373316 TINF2Q9BSI4 451 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms