RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 INVSQ9Y283 1065 aa16.53■□□□□ 0.24
TMEM53-203ENST00000372242 DNTTP04053 509 aa16.52■□□□□ 0.24
TMEM53-203ENST00000372242 ACADMP11310 421 aa16.52■□□□□ 0.24
TMEM53-203ENST00000372242 CD68P34810 354 aaPredicted RBP16.52■□□□□ 0.24
TMEM53-203ENST00000372242 CSNK1DP48730 415 aa16.52■□□□□ 0.24
TMEM53-203ENST00000372242 RAD51Q06609 339 aa16.52■□□□□ 0.24
TMEM53-203ENST00000372242 AADATQ8N5Z0 425 aa16.52■□□□□ 0.24
TMEM53-203ENST00000372242 FRMD1Q8N878 549 aa16.52■□□□□ 0.24
TMEM53-203ENST00000372242 TMIEQ8NEW7 156 aa16.52■□□□□ 0.24
TMEM53-203ENST00000372242 ARRDC2Q8TBH0 407 aa16.52■□□□□ 0.24
TMEM53-203ENST00000372242 CCDC110Q8TBZ0 833 aa16.52■□□□□ 0.24
TMEM53-203ENST00000372242 CPEB1Q9BZB8 566 aaKnown RBP16.52■□□□□ 0.24
TMEM53-203ENST00000372242 C1QTNF3-AMACRE9PGA6 284 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 AXIN1O15169 862 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 HOXA6P31267 233 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 TPMTP51580 245 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 AP1S1P61966 158 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 ANKRD20A2Q5SQ80 823 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 ANKRD20A1Q5TYW2 823 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 ANKRD20A3Q5VUR7 823 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 ALG1LQ6GMV1 187 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 TTC27Q6P3X3 843 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 NCEH1Q6PIU2 408 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 GDPD4Q6W3E5 623 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 PRUNE1Q86TP1 453 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 FAM124AQ86V42 546 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 FAM160A2Q8N612 972 aaPredicted RBP16.52■□□□□ 0.23
TMEM53-203ENST00000372242 GANCQ8TET4 914 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 MAGOHBQ96A72 148 aaKnown RBP16.52■□□□□ 0.23
TMEM53-203ENST00000372242 ARRDC3Q96B67 414 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 KLHL32Q96NJ5 620 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 VAT1Q99536 393 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 FERMT1Q9BQL6 677 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 PABPC3Q9H361 631 aaKnown RBP16.52■□□□□ 0.23
TMEM53-203ENST00000372242 GLOD4Q9HC38 313 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 PCDHGC4Q9Y5F7 938 aa16.52■□□□□ 0.23
TMEM53-203ENST00000372242 A0A1W2PP55 124 aa16.51■□□□□ 0.23
TMEM53-203ENST00000372242 KIF2AO00139 706 aaPredicted RBP16.51■□□□□ 0.23
TMEM53-203ENST00000372242 RNASEH2AO75792 299 aaKnown RBP16.51■□□□□ 0.23
TMEM53-203ENST00000372242 URI1O94763 535 aaPredicted RBP16.51■□□□□ 0.23
TMEM53-203ENST00000372242 ADH1BP00325 375 aa16.51■□□□□ 0.23
TMEM53-203ENST00000372242 ITGAVP06756 1048 aa16.51■□□□□ 0.23
TMEM53-203ENST00000372242 SP9P0CG40 484 aa16.51■□□□□ 0.23
TMEM53-203ENST00000372242 NFKB1P19838 968 aa16.51■□□□□ 0.23
TMEM53-203ENST00000372242 C5AR1P21730 350 aa16.51■□□□□ 0.23
TMEM53-203ENST00000372242 DRD3P35462 400 aa16.51■□□□□ 0.23
TMEM53-203ENST00000372242 CD86P42081 329 aa16.51■□□□□ 0.23
TMEM53-203ENST00000372242 FAM46CQ5VWP2 391 aa16.51■□□□□ 0.23
TMEM53-203ENST00000372242 DRICH1Q6PGQ1 229 aaPredicted RBP16.51■□□□□ 0.23
TMEM53-203ENST00000372242 SPATA22Q8NHS9 363 aa16.51■□□□□ 0.23
TMEM53-203ENST00000372242 RBM15Q96T37 977 aaKnown RBP eCLIP16.51■□□□□ 0.23
TMEM53-203ENST00000372242 ATP13A3Q9H7F0 1226 aa16.51■□□□□ 0.23
TMEM53-203ENST00000372242 HOMER3Q9NSC5 361 aa16.51■□□□□ 0.23
TMEM53-203ENST00000372242 HAUS2Q9NVX0 235 aa16.51■□□□□ 0.23
TMEM53-203ENST00000372242 FBXL12Q9NXK8 326 aa16.51■□□□□ 0.23
TMEM53-203ENST00000372242 UBP1Q9NZI7 540 aa16.51■□□□□ 0.23
TMEM53-203ENST00000372242 CYP8B1Q9UNU6 501 aa16.51■□□□□ 0.23
TMEM53-203ENST00000372242 ANKRD36A6QL64 1941 aa16.51■□□□□ 0.23
TMEM53-203ENST00000372242 EML5Q05BV3 1969 aa16.5■□□□□ 0.23
TMEM53-203ENST00000372242 STK10O94804 968 aaKnown RBP16.5■□□□□ 0.23
TMEM53-203ENST00000372242 IFNB1P01574 187 aa16.5■□□□□ 0.23
TMEM53-203ENST00000372242 MMP2P08253 660 aa16.5■□□□□ 0.23
TMEM53-203ENST00000372242 C7P10643 843 aa16.5■□□□□ 0.23
TMEM53-203ENST00000372242 ETS1P14921 441 aa16.5■□□□□ 0.23
TMEM53-203ENST00000372242 PAFAH1B1P43034 410 aa16.5■□□□□ 0.23
TMEM53-203ENST00000372242 ZBTB16Q05516 673 aa16.5■□□□□ 0.23
TMEM53-203ENST00000372242 BCL2L1Q07817 233 aa16.5■□□□□ 0.23
TMEM53-203ENST00000372242 CNTN1Q12860 1018 aa16.5■□□□□ 0.23
TMEM53-203ENST00000372242 PRPF39Q86UA1 669 aaKnown RBP16.5■□□□□ 0.23
TMEM53-203ENST00000372242 HDDC3Q8N4P3 179 aa16.5■□□□□ 0.23
TMEM53-203ENST00000372242 TAB3Q8N5C8 712 aaPredicted RBP16.5■□□□□ 0.23
TMEM53-203ENST00000372242 GLIS1Q8NBF1 620 aa16.5■□□□□ 0.23
TMEM53-203ENST00000372242 LRIG1Q96JA1 1093 aa16.5■□□□□ 0.23
TMEM53-203ENST00000372242 SPATA13Q96N96 652 aa16.5■□□□□ 0.23
TMEM53-203ENST00000372242 TUBGCP5Q96RT8 1024 aa16.5■□□□□ 0.23
TMEM53-203ENST00000372242 OMDQ99983 421 aa16.5■□□□□ 0.23
TMEM53-203ENST00000372242 SUV39H2Q9H5I1 410 aa16.5■□□□□ 0.23
TMEM53-203ENST00000372242 ITM2CQ9NQX7 267 aa16.5■□□□□ 0.23
TMEM53-203ENST00000372242 TRHDEQ9UKU6 1024 aa16.5■□□□□ 0.23
TMEM53-203ENST00000372242 GOLGA6L10A0A0M3HER8 536 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 CFAP69A5D8W1 941 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 C5orf60A6NFR6 353 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 H0Y858 1186 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 MT-CYBP00156 380 aaPredicted RBP16.49■□□□□ 0.23
TMEM53-203ENST00000372242 TUBB4AP04350 444 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 SERPINA4P29622 427 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 STIP1P31948 543 aaKnown RBP16.49■□□□□ 0.23
TMEM53-203ENST00000372242 MAPK8P45983 427 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 NUBP1P53384 320 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 SRSF5Q13243 272 aaKnown RBP16.49■□□□□ 0.23
TMEM53-203ENST00000372242 CYP1B1Q16678 543 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 TTC31Q49AM3 519 aaPredicted RBP16.49■□□□□ 0.23
TMEM53-203ENST00000372242 ZNF805Q5CZA5 627 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 LRRC73Q5JTD7 316 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.49■□□□□ 0.23
TMEM53-203ENST00000372242 PDCD6IPQ8WUM4 868 aaKnown RBP16.49■□□□□ 0.23
TMEM53-203ENST00000372242 IMP4Q96G21 291 aaKnown RBP16.49■□□□□ 0.23
TMEM53-203ENST00000372242 OSBPL1AQ9BXW6 950 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 SLC25A51Q9H1U9 297 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 NEUROG2Q9H2A3 272 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms