RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 KIFC1Q9BW19 673 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 MRPL9Q9BYD2 267 aaKnown RBP12.97□□□□□ -0.33
GPC3-201ENST00000370818 TLR8Q9NR97 1041 aaKnown RBP12.97□□□□□ -0.33
GPC3-201ENST00000370818 FNIP2Q9P278 1114 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 ANGPTL2Q9UKU9 493 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 PSMD3O43242 534 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 HOXA2O43364 376 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 OR6B1O95007 311 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 PRKCGP05129 697 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 BPGMP07738 259 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 ANPEPP15144 967 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 RHOQP17081 205 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 ATF6P18850 670 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 ADRA1AP35348 466 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 GMPRP36959 345 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 PDE1BQ01064 536 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 ELAVL2Q12926 359 aaKnown RBP12.97□□□□□ -0.33
GPC3-201ENST00000370818 CHI3L2Q15782 390 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 C10orf120Q5SQS8 335 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 STXBP5Q5T5C0 1151 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 TIGD7Q6NT04 549 aaPredicted RBP12.97□□□□□ -0.33
GPC3-201ENST00000370818 FBXL22Q6P050 247 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 C16orf46Q6P387 395 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 KYAT3Q6YP21 454 aaKnown RBP12.97□□□□□ -0.33
GPC3-201ENST00000370818 STRA8Q7Z7C7 330 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 KCNMB4Q86W47 210 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 IGSF8Q969P0 613 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 ISL2Q96A47 359 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 BTN2A3PQ96KV6 586 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 TRIM55Q9BYV6 548 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 ZYG11BQ9C0D3 744 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 TMEM248Q9NWD8 314 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 PPARGC1AQ9UBK2 798 aaKnown RBP12.97□□□□□ -0.33
GPC3-201ENST00000370818 CDY1Q9Y6F8 540 aa12.97□□□□□ -0.33
GPC3-201ENST00000370818 NYNRINQ9P2P1 1898 aaKnown RBP12.97□□□□□ -0.33
GPC3-201ENST00000370818 SMIM31A0A1B0GVY4 71 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 AP3B1O00203 1094 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 ANXA9O76027 345 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 CXCL10P02778 98 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 ZDHHC11BP0C7U3 371 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 PIM1P11309 404 aaPredicted RBP12.96□□□□□ -0.33
GPC3-201ENST00000370818 MAGEA12P43365 314 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 LIMK2P53671 638 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 SMARCB1Q12824 385 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 TMEM259Q4ZIN3 620 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 N4BP2L1Q5TBK1 243 aaPredicted RBP12.96□□□□□ -0.33
GPC3-201ENST00000370818 FSTL4Q6MZW2 842 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 KLC3Q6P597 504 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 ANKS3Q6ZW76 656 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 CMC1Q7Z7K0 106 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 SATL1Q86VE3 508 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 NUDCD3Q8IVD9 361 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 DCLK2Q8N568 766 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 E2F7Q96AV8 911 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 HMCESQ96FZ2 354 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 ATXN7L3BQ96GX2 97 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 DNAJC1Q96KC8 554 aaKnown RBP12.96□□□□□ -0.33
GPC3-201ENST00000370818 CATSPER2Q96P56 530 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 C20orf27Q9GZN8 174 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 CCSER2Q9H7U1 834 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 ZNF395Q9H8N7 513 aaPredicted RBP12.96□□□□□ -0.33
GPC3-201ENST00000370818 RMI1Q9H9A7 625 aa12.96□□□□□ -0.33
GPC3-201ENST00000370818 OLA1Q9NTK5 396 aaKnown RBP12.96□□□□□ -0.33
GPC3-201ENST00000370818 C20orf96Q9NUD7 363 aaPredicted RBP12.96□□□□□ -0.33
GPC3-201ENST00000370818 A0A0G2JND7 137 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 CCDC195A0A1B0GUA6 201 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 CCDC78A2IDD5 438 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 GOLGA8TH3BQL2 631 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 H7C4K7 107 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 BIRC5O15392 142 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 EFEMP2O95967 443 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 HNRNPCP07910 306 aaKnown RBP eCLIP12.96□□□□□ -0.345e-7■■□□□ 11.5
GPC3-201ENST00000370818 DNAJB2P25686 324 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 NDST2P52849 883 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 ATN1P54259 1190 aaPredicted RBP12.96□□□□□ -0.34
GPC3-201ENST00000370818 IRX4P78413 519 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 TMPRSS15P98073 1019 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 CDC16Q13042 620 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 CFAP157Q5JU67 520 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 ATP6V0D2Q8N8Y2 350 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 GIPC2Q8TF65 315 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 C7orf26Q96N11 449 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 FICDQ9BVA6 458 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 HIPK3Q9H422 1215 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 EBF3Q9H4W6 596 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 OGDHLQ9ULD0 1010 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 SCN5AQ14524 2016 aa12.96□□□□□ -0.34
GPC3-201ENST00000370818 SLC12A8A0AV02 714 aa12.95□□□□□ -0.34
GPC3-201ENST00000370818 F8W8V4 182 aa12.95□□□□□ -0.34
GPC3-201ENST00000370818 J3KR12 359 aa12.95□□□□□ -0.34
GPC3-201ENST00000370818 PLIN3O60664 434 aa12.95□□□□□ -0.34
GPC3-201ENST00000370818 GLRA3O75311 464 aa12.95□□□□□ -0.34
GPC3-201ENST00000370818 SNNO75324 88 aaPredicted RBP12.95□□□□□ -0.34
GPC3-201ENST00000370818 HAUS5O94927 633 aa12.95□□□□□ -0.34
GPC3-201ENST00000370818 HMBSP08397 361 aa12.95□□□□□ -0.34
GPC3-201ENST00000370818 TYK2P29597 1187 aa12.95□□□□□ -0.34
GPC3-201ENST00000370818 SPRP35270 261 aaPredicted RBP12.95□□□□□ -0.34
GPC3-201ENST00000370818 ABCG1P45844 678 aa12.95□□□□□ -0.34
GPC3-201ENST00000370818 RAP1GDS1P52306 607 aa12.95□□□□□ -0.34
GPC3-201ENST00000370818 HNRNPDQ14103 355 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms