RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 MAN1A1P33908 653 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 LTBRP36941 435 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 ACADSBP45954 432 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 DAOAP59103 153 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 TAS2R40P59535 323 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 TAP1Q03518 808 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 KRT17Q04695 432 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 ADIGQ0VDE8 80 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 ELF2Q15723 593 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 FAM102AQ5T9C2 384 aaPredicted RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 PAPD7Q5XG87 772 aaKnown RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 PM20D1Q6GTS8 502 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 KIAA1841Q6NSI8 718 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 C11orf63Q6NUN7 778 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 DAAM2Q86T65 1068 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 CILP2Q8IUL8 1156 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 SCN4BQ8IWT1 228 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 LRRC56Q8IYG6 542 aaPredicted RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 RXFP2Q8WXD0 754 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 KRT35Q92764 455 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 CD101Q93033 1021 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 MCEEQ96PE7 176 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 NAPGQ99747 312 aaPredicted RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 LRFN3Q9BTN0 628 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 SELENOOQ9BVL4 669 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 ULBP1Q9BZM6 244 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 LRRC4Q9HBW1 653 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 MRPL47Q9HD33 250 aaKnown RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 DMAP1Q9NPF5 467 aaPredicted RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 WDR35Q9P2L0 1181 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 ANAPC7Q9UJX3 599 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 MTUS1Q9ULD2 1270 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 SMG5Q9UPR3 1016 aaKnown RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 SF3B6Q9Y3B4 125 aaKnown RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 JRKLQ9Y4A0 524 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 SPO11Q9Y5K1 396 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 GBF1Q92538 1859 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 DYTNA2CJ06 578 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 CTAGE9A4FU28 777 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 OR14I1A6ND48 311 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 TCAF2A6NFQ2 919 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 C2CD4BA6NLJ0 364 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 YJEFN3A6XGL0 299 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 HIDE1A8MVS5 230 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 E7ENQ6 273 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 MYO1FO00160 1098 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 AMY2AP04746 511 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 URODP06132 367 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 SPATA31D3P0C874 917 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 ATF6P18850 670 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 AMY2BP19961 511 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 GRK2P25098 689 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 MARCKSL1P49006 195 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 PRIM2P49643 509 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 PEX5P50542 639 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 SLC8A3P57103 927 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 GEMIN4P57678 1058 aaKnown RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 PITX1P78337 314 aaPredicted RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 PHC1P78364 1004 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 MRPS5P82675 430 aaKnown RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 SRSF3P84103 164 aaKnown RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 CCDC14Q49A88 953 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 SYPL2Q5VXT5 272 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 TXNRD3NBQ6F5E7 133 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 ESRP1Q6NXG1 681 aaKnown RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 DCUN1D2Q6PH85 259 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 VSTM1Q6UX27 236 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 SPATA31D4Q6ZUB0 917 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 SLC26A9Q7LBE3 791 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 PEX26Q7Z412 305 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 SCD5Q86SK9 330 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 ZDHHC17Q8IUH5 632 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 GPR65Q8IYL9 337 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 DEFB106AQ8N104 65 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 MRPL43Q8N983 215 aaKnown RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 MSANTD4Q8NCY6 345 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 NUP43Q8NFH3 380 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 KIF18AQ8NI77 898 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 ZNF461Q8TAF7 563 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 ALG3Q92685 438 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 FBXW5Q969U6 566 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 HES6Q96HZ4 224 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 KLHL5Q96PQ7 755 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 ALS2CR12Q96Q35 445 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 JMJD8Q96S16 334 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 DDX23Q9BUQ8 820 aaKnown RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 ZDHHC5Q9C0B5 715 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 WDR12Q9GZL7 423 aaKnown RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 SEMA4AQ9H3S1 761 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 ZNF552Q9H707 407 aaPredicted RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 ZMAT4Q9H898 229 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 CERS4Q9HA82 394 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 MRPL17Q9NRX2 175 aaKnown RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 IL37Q9NZH6 218 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 CALCOCO1Q9P1Z2 691 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 TNFRSF10DQ9UBN6 386 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 AFF4Q9UHB7 1163 aaKnown RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 CDC23Q9UJX2 597 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 AMFRQ9UKV5 643 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 GPR52Q9Y2T5 361 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms