RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 TMPRSS6Q8IU80 811 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 GPN3Q9UHW5 284 aaPredicted RBP18.32■□□□□ 0.52
SNX27-202ENST00000368841 IKZF3Q9UKT9 509 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 MED26O95402 600 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 DBTP11182 482 aaKnown RBP18.32■□□□□ 0.52
SNX27-202ENST00000368841 CHKAP35790 457 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 PERM1Q5SV97 790 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 ALYREFQ86V81 257 aaKnown RBP18.32■□□□□ 0.52
SNX27-202ENST00000368841 CAPSLQ8WWF8 208 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 GULP1Q9UBP9 304 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 ZNF232Q9UNY5 417 aa18.32■□□□□ 0.52
SNX27-202ENST00000368841 CD3EAPO15446 510 aaKnown RBP18.31■□□□□ 0.52
SNX27-202ENST00000368841 ADRB2P07550 413 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 NDUFV1P49821 464 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 DGUOKQ16854 277 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 STXBP5Q5T5C0 1151 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 FAM98AQ8NCA5 519 aaKnown RBP18.31■□□□□ 0.52
SNX27-202ENST00000368841 TSEN2Q8NCE0 465 aaKnown RBP18.31■□□□□ 0.52
SNX27-202ENST00000368841 SKA1Q96BD8 255 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 ASAH2Q9NR71 780 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 PTGFRNQ9P2B2 879 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 TPRKBQ9Y3C4 175 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 CCNB1P14635 433 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 ME2P23368 584 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 RPL14P50914 215 aaKnown RBP18.31■□□□□ 0.52
SNX27-202ENST00000368841 RFX4Q33E94 735 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 PAGE2BQ5JRK9 111 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 ATG10Q9H0Y0 220 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 ATP6AP2A0A1C7CYW4 349 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 SSNA1O43805 119 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 ATP6AP2O75787 350 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 RABGGTBP53611 331 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 ARMC3Q5W041 872 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 CES5AQ6NT32 575 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 PSTKQ8IV42 348 aaKnown RBP18.31■□□□□ 0.52
SNX27-202ENST00000368841 DHRSXQ8N5I4 330 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 BHLHE41Q9C0J9 482 aaPredicted RBP18.31■□□□□ 0.52
SNX27-202ENST00000368841 RIOX1Q9H6W3 641 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 MSRAQ9UJ68 235 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 C2orf71A6NGG8 1288 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 IQCF5A8MTL0 148 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 LYPLA1O75608 230 aaPredicted RBP18.31■□□□□ 0.52
SNX27-202ENST00000368841 ADGRG2Q8IZP9 1017 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 JSRP1Q96MG2 331 aaPredicted RBP18.31■□□□□ 0.52
SNX27-202ENST00000368841 DPP7Q9UHL4 492 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.31■□□□□ 0.52
SNX27-202ENST00000368841 SLC28A2O43868 658 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 CCNYL3P0C7X3 344 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 MCIDASD6RGH6 385 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 TRUB2O95900 331 aaKnown RBP18.31■□□□□ 0.52
SNX27-202ENST00000368841 LTA4HP09960 611 aaKnown RBP18.31■□□□□ 0.52
SNX27-202ENST00000368841 TGFB2P61812 414 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 FBXO48Q5FWF7 155 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 GALNT5Q7Z7M9 940 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 EGFL7Q9UHF1 273 aa18.31■□□□□ 0.52
SNX27-202ENST00000368841 POLR3HQ9Y535 204 aaPredicted RBP18.31■□□□□ 0.52
SNX27-202ENST00000368841 PSMD9O00233 223 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 SNRPD1P62314 119 aaKnown RBP18.3■□□□□ 0.52
SNX27-202ENST00000368841 FRG1Q14331 258 aaKnown RBP18.3■□□□□ 0.52
SNX27-202ENST00000368841 TRMT5Q32P41 509 aaKnown RBP18.3■□□□□ 0.52
SNX27-202ENST00000368841 ARHGAP36Q6ZRI8 547 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 E9PCH4 1651 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 TCRBV5S4A2TA0A5A2 114 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 PRRG4Q9BZD6 226 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 MARCH7Q9H992 704 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 B4GALT5O43286 388 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 ANXA5P08758 320 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 MOXD1Q6UVY6 613 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 HNRNPLLQ8WVV9 542 aaKnown RBP18.3■□□□□ 0.52
SNX27-202ENST00000368841 PCDHGA3Q9Y5H0 932 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 MANSC4A6NHS7 340 aaPredicted RBP18.3■□□□□ 0.52
SNX27-202ENST00000368841 TLX1P31314 330 aaPredicted RBP18.3■□□□□ 0.52
SNX27-202ENST00000368841 OLFML2AQ68BL7 652 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 ZDHHC17Q8IUH5 632 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 ZNF655Q8N720 491 aaPredicted RBP18.3■□□□□ 0.52
SNX27-202ENST00000368841 KLHL5Q96PQ7 755 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 HPSEQ9Y251 543 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 MSI1O43347 362 aaKnown RBP18.3■□□□□ 0.52
SNX27-202ENST00000368841 VEGFAP15692 232 aaPredicted RBP18.3■□□□□ 0.52
SNX27-202ENST00000368841 AKT2P31751 481 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 STXBP1P61764 594 aaKnown RBP18.3■□□□□ 0.52
SNX27-202ENST00000368841 PMF1Q6P1K2 205 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 MAGEC3Q8TD91 643 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 IMP3Q9NV31 184 aaKnown RBP18.3■□□□□ 0.52
SNX27-202ENST00000368841 TUFMP49411 452 aaKnown RBP18.3■□□□□ 0.52
SNX27-202ENST00000368841 PREPLQ4J6C6 727 aaPredicted RBP18.3■□□□□ 0.52
SNX27-202ENST00000368841 PGBD2Q6P3X8 592 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 NRDE2Q9H7Z3 1164 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 ABCB10Q9NRK6 738 aa18.3■□□□□ 0.52
SNX27-202ENST00000368841 ACKR2O00590 384 aa18.29■□□□□ 0.52
SNX27-202ENST00000368841 UBA1P22314 1058 aaKnown RBP18.29■□□□□ 0.52
SNX27-202ENST00000368841 MAMLD1Q13495 774 aa18.29■□□□□ 0.52
SNX27-202ENST00000368841 EXOC3L1Q86VI1 746 aa18.29■□□□□ 0.52
SNX27-202ENST00000368841 C8orf59Q8N0T1 100 aaPredicted RBP18.29■□□□□ 0.52
SNX27-202ENST00000368841 TRNT1Q96Q11 434 aaKnown RBP18.29■□□□□ 0.52
SNX27-202ENST00000368841 MRPL45Q9BRJ2 306 aaKnown RBP18.29■□□□□ 0.52
SNX27-202ENST00000368841 MRPL9Q9BYD2 267 aaKnown RBP18.29■□□□□ 0.52
SNX27-202ENST00000368841 MTFR1LQ9H019 292 aa18.29■□□□□ 0.52
SNX27-202ENST00000368841 PPP3CAQ08209 521 aa18.29■□□□□ 0.52
SNX27-202ENST00000368841 SPANXN2Q5MJ10 180 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms