RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 ADRA1BP35368 520 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 PRIM2P49643 509 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 ACADVLP49748 655 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 MBTD1Q05BQ5 628 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 CNPY1Q3B7I2 92 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 C6orf183Q5T699 404 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 RIN3Q8TB24 985 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 RASSF5Q8WWW0 418 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 TFAP2BQ92481 460 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 ZYG11BQ9C0D3 744 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 MARCH7Q9H992 704 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 UXTQ9UBK9 157 aaPredicted RBP13.39□□□□□ -0.27
PTPRK-204ENST00000368210 MYH2Q9UKX2 1941 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 CCNT2O60583 730 aaKnown RBP13.39□□□□□ -0.27
PTPRK-204ENST00000368210 TNFRSF21O75509 655 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 PDE9AO76083 593 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 BRCC3P46736 316 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 DCLRE1AQ6PJP8 1040 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 GET4Q7L5D6 327 aaPredicted RBP13.39□□□□□ -0.27
PTPRK-204ENST00000368210 ARCQ7LC44 396 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 P3H2Q8IVL5 708 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 GRPEL2Q8TAA5 225 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 CSPG4P5Q96PW8 444 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 PNMA8BQ9ULN7 279 aaPredicted RBP13.39□□□□□ -0.27
PTPRK-204ENST00000368210 PLA2G4CQ9UP65 541 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 SORCS3Q9UPU3 1222 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 DNM1LO00429 736 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 BTN3A1O00481 513 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 PMM2O15305 246 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 HALP42357 657 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 DHDDSQ86SQ9 333 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 PLD5Q8N7P1 536 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 SLC4A11Q8NBS3 891 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 FAM53CQ9NYF3 392 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 CCDC167Q9P0B6 97 aa13.39□□□□□ -0.27
PTPRK-204ENST00000368210 MRASO14807 208 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 FMO4P31512 558 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 SKIV2LQ15477 1246 aaKnown RBP13.38□□□□□ -0.27
PTPRK-204ENST00000368210 CYP51A1Q16850 503 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 ATG14Q6ZNE5 492 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 METTL6Q8TCB7 284 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 PHF21AQ96BD5 680 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 FAM50BQ9Y247 325 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 DHX15O43143 795 aaKnown RBP13.38□□□□□ -0.27
PTPRK-204ENST00000368210 ME2P23368 584 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 GBE1Q04446 702 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 BCL2L1Q07817 233 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 PLD1Q13393 1074 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 TUSC3Q13454 348 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 C16orf59Q7L2K0 433 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 C12orf50Q8NA57 414 aaPredicted RBP13.38□□□□□ -0.27
PTPRK-204ENST00000368210 CDRT15Q96T59 188 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.38□□□□□ -0.271e-6■■□□□ 12.2
PTPRK-204ENST00000368210 STOML2Q9UJZ1 356 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 CLCA2Q9UQC9 943 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 NDUFAF1Q9Y375 327 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 CNTNAP1P78357 1384 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 BUD23O43709 281 aaKnown RBP13.38□□□□□ -0.27
PTPRK-204ENST00000368210 SLC2A4P14672 509 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 AIF1P55008 147 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 NEDD8Q15843 81 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 HECTD3Q5T447 861 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 ARMC12Q5T9G4 340 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 PMF1Q6P1K2 205 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 ANKRD23Q86SG2 305 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 SIAH1Q8IUQ4 282 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 OR56A4Q8NGH8 313 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 ASB2Q96Q27 587 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 OSBPL7Q9BZF2 842 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 OSBPL6Q9BZF3 934 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 WDR12Q9GZL7 423 aaKnown RBP13.38□□□□□ -0.27
PTPRK-204ENST00000368210 CATSPERZQ9NTU4 200 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 TMEM39AQ9NV64 488 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 MPP6Q9NZW5 540 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 CLUHO75153 1309 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 ARPC4-TTLL3A0A0A6YYG9 625 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 TREHO43280 583 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 KATNA1O75449 491 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 CKBP12277 381 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 UQCRBP14927 111 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 JAG1P78504 1218 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 SCRN3Q0VDG4 424 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 RIPOR1Q6ZS17 1223 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 FNDC5Q8NAU1 212 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 OTULINQ96BN8 352 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 FCRL2Q96LA5 508 aaPredicted RBP13.38□□□□□ -0.27
PTPRK-204ENST00000368210 ZFP42Q96MM3 310 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 CITED4Q96RK1 184 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 ACE2Q9BYF1 805 aaPredicted RBP13.38□□□□□ -0.27
PTPRK-204ENST00000368210 FBXO6Q9NRD1 293 aaPredicted RBP13.38□□□□□ -0.27
PTPRK-204ENST00000368210 TBCCD1Q9NVR7 557 aa13.38□□□□□ -0.27
PTPRK-204ENST00000368210 CCDC59Q9P031 241 aaKnown RBP13.38□□□□□ -0.27
PTPRK-204ENST00000368210 IGSF6O95976 241 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 LTA4HP09960 611 aaKnown RBP13.37□□□□□ -0.27
PTPRK-204ENST00000368210 PRKAR2AP13861 404 aaKnown RBP13.37□□□□□ -0.27
PTPRK-204ENST00000368210 ATAD3BQ5T9A4 648 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 SLC26A9Q7LBE3 791 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 SLC41A1Q8IVJ1 513 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 CPT1BQ92523 772 aa13.37□□□□□ -0.27
PTPRK-204ENST00000368210 SEMA3CQ99985 751 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms