RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 GDAP1L1Q96MZ0 367 aa10□□□□□ -0.81
CD48-202ENST00000368046 KLHL32Q96NJ5 620 aa10□□□□□ -0.81
CD48-202ENST00000368046 ZNF599Q96NL3 588 aa10□□□□□ -0.81
CD48-202ENST00000368046 OSBPL1AQ9BXW6 950 aa10□□□□□ -0.81
CD48-202ENST00000368046 ZDHHC6Q9H6R6 413 aa10□□□□□ -0.81
CD48-202ENST00000368046 PDFQ9HBH1 243 aa10□□□□□ -0.81
CD48-202ENST00000368046 FSCN3Q9NQT6 498 aa10□□□□□ -0.81
CD48-202ENST00000368046 ETNK2Q9NVF9 386 aa10□□□□□ -0.81
CD48-202ENST00000368046 DNAAF2Q9NVR5 837 aaKnown RBP10□□□□□ -0.81
CD48-202ENST00000368046 DMTF1Q9Y222 760 aa10□□□□□ -0.81
CD48-202ENST00000368046 ANKRD6Q9Y2G4 727 aa10□□□□□ -0.81
CD48-202ENST00000368046 EPN1Q9Y6I3 576 aaPredicted RBP10□□□□□ -0.81
CD48-202ENST00000368046 SLCO1B1Q9Y6L6 691 aa10□□□□□ -0.81
CD48-202ENST00000368046 A0A1B0GVT2 93 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 UPK3BL1B0FP48 263 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 UPK3BL2E5RIL1 263 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 VILLO15195 856 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 AP1G1O43747 822 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 RNGTTO60942 597 aaKnown RBP9.99□□□□□ -0.81
CD48-202ENST00000368046 PCDH8O95206 1070 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 IGSF6O95976 241 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 CD48P09326 243 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 ADRB3P13945 408 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 ITGB7P26010 798 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 CD38P28907 300 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 SERPINB6P35237 376 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 SLC1A1P43005 524 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 RENBPP51606 427 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 BNC1Q01954 994 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 GRIK2Q13002 908 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 STAT4Q14765 748 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 GRM3Q14832 879 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 SPA17Q15506 151 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 HLA-BQ31612 363 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 ANKRD20A8PQ5CZ79 823 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 ATXN7L2Q5T6C5 722 aaPredicted RBP9.99□□□□□ -0.81
CD48-202ENST00000368046 TMCO4Q5TGY1 634 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 ADAT2Q7Z6V5 191 aaKnown RBP9.99□□□□□ -0.81
CD48-202ENST00000368046 TTC7BQ86TV6 843 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 CPNE8Q86YQ8 564 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 TP53INP2Q8IXH6 220 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 NPWQ8N729 165 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 NETO2Q8NC67 525 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 OR6K2Q8NGY2 324 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 CALN1Q9BXU9 219 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 GAREM1Q9H706 876 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 LUC7LQ9NQ29 371 aaKnown RBP9.99□□□□□ -0.81
CD48-202ENST00000368046 LHX3Q9UBR4 397 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 PCDHA13Q9Y5I0 950 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 FADS3Q9Y5Q0 445 aa9.99□□□□□ -0.81
CD48-202ENST00000368046 DNAH14Q0VDD8 3507 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 DMXL1Q9Y485 3027 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 A0A1W2PQU0 124 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 TMEM110-MUSTN1A8MSY1 372 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 PRAMEF26H0Y7S4 382 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 WNT9AO14904 365 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 TSPAN6O43657 245 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 DFNA5O60443 496 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 MAFKO60675 156 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 GJB3O75712 270 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 KCNK5O95279 499 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 UGT2B4P06133 528 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 CSRP1P21291 193 aaKnown RBP9.98□□□□□ -0.81
CD48-202ENST00000368046 FECHP22830 423 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 KDELR1P24390 212 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 MAT2AP31153 395 aaKnown RBP9.98□□□□□ -0.81
CD48-202ENST00000368046 NOP2P46087 812 aaKnown RBP9.98□□□□□ -0.81
CD48-202ENST00000368046 HADHBP55084 474 aaKnown RBP9.98□□□□□ -0.81
CD48-202ENST00000368046 C21orf59P57076 290 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 PPP2CBP62714 309 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 PPP2CAP67775 309 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 DPYSL3Q14195 570 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 LBRQ14739 615 aaKnown RBP9.98□□□□□ -0.81
CD48-202ENST00000368046 PAFAH1B3Q15102 231 aaKnown RBP9.98□□□□□ -0.81
CD48-202ENST00000368046 KIF19Q2TAC6 998 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 SETMARQ53H47 684 aaPredicted RBP9.98□□□□□ -0.81
CD48-202ENST00000368046 SLC45A4Q5BKX6 768 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 ZFYVE27Q5T4F4 411 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 LRRC38Q5VT99 294 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 NAPEPLDQ6IQ20 393 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 ARHGAP36Q6ZRI8 547 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 SRLQ86TD4 932 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 HORMAD1Q86X24 394 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 MFSD2AQ8NA29 543 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 TSEN2Q8NCE0 465 aaKnown RBP9.98□□□□□ -0.81
CD48-202ENST00000368046 PCDH19Q8TAB3 1148 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 NSMCE1Q8WV22 266 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 SERAC1Q96JX3 654 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 ZNF641Q96N77 438 aaPredicted RBP9.98□□□□□ -0.81
CD48-202ENST00000368046 SLC6A18Q96N87 628 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 PSKH2Q96QS6 385 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 ZNF670Q9BS34 389 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 SLC17A9Q9BYT1 436 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 SUV39H2Q9H5I1 410 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 SP110Q9HB58 689 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 AASDHPPTQ9NRN7 309 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 IMPACTQ9P2X3 320 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 DKK3Q9UBP4 350 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 SNX11Q9Y5W9 270 aa9.98□□□□□ -0.81
CD48-202ENST00000368046 ALG6Q9Y672 507 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms