RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 KHSRPQ92945 711 aaKnown RBP eCLIP11.15□□□□□ -0.62
NECTIN4-201ENST00000368012 LPPQ93052 612 aa11.15□□□□□ -0.62
NECTIN4-201ENST00000368012 B3GALT6Q96L58 329 aa11.15□□□□□ -0.62
NECTIN4-201ENST00000368012 SLC29A1Q99808 456 aa11.15□□□□□ -0.62
NECTIN4-201ENST00000368012 NT5MQ9NPB1 228 aa11.15□□□□□ -0.62
NECTIN4-201ENST00000368012 NDUFA13Q9P0J0 144 aa11.15□□□□□ -0.62
NECTIN4-201ENST00000368012 CROTQ9UKG9 612 aa11.15□□□□□ -0.62
NECTIN4-201ENST00000368012 TRIP11Q15643 1979 aa11.15□□□□□ -0.63
NECTIN4-201ENST00000368012 G3V2L1 256 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 MYL3P08590 195 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 IL10P22301 178 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 BDNFP23560 247 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 ACADSBP45954 432 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 TAZQ16635 292 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 RBM20Q5T481 1227 aaKnown RBP11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 SDHAF4Q5VUM1 108 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 C9orf57Q5W0N0 161 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 GRAMD4Q6IC98 578 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 CEP97Q8IW35 865 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 OXSMQ9NWU1 459 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 FZD10Q9ULW2 581 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 ZBTB42B2RXF5 422 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 H3BNX3 289 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 MATN2O00339 956 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 VILLO15195 856 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 MAP4P27816 1152 aaKnown RBP11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 NOS2P35228 1153 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 NR1H2P55055 460 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 SH3BGRP55822 239 aaPredicted RBP11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 NIPAL4Q0D2K0 466 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 XKR5Q6UX68 686 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 FAM35AQ86V20 835 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 MID1IP1Q9NPA3 183 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 RSL24D1Q9UHA3 163 aaKnown RBP11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 FAM50BQ9Y247 325 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 COL11A2P13942 1736 aaPredicted RBP11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 C1orf232A0A0U1RR37 186 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 MAN1A2O60476 641 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 ENDOD1O94919 500 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 SIX3O95343 332 aaPredicted RBP11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 GSRP00390 522 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 LINC00032P0C843 101 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 SETSIPP0DME0 302 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 TRAF2Q12933 501 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 PTPRCAPQ14761 206 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 CYP51A1Q16850 503 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 PFKFB4Q16877 469 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 C6orf10Q5SRN2 563 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 NEPROQ6NW34 567 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 NOTUMQ6P988 496 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 DNAJC14Q6Y2X3 702 aaPredicted RBP11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 MIB1Q86YT6 1006 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 RIOX2Q8IUF8 465 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 RNF168Q8IYW5 571 aaPredicted RBP11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 NPWQ8N729 165 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 ARMC7Q9H6L4 198 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 TMCO1Q9UM00 188 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 UBQLN1Q9UMX0 589 aaKnown RBP11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 TIMM22Q9Y584 194 aa11.14□□□□□ -0.63
NECTIN4-201ENST00000368012 COL2A1P02458 1487 aaPredicted RBP11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 SMIM28A0A1B0GU29 152 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 MYBPHLA2RUH7 354 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 TRPC5OSA6NMA1 111 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 TRIM38O00635 465 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 CLOCKO15516 846 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 LRIG2O94898 1065 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 AP2A1O95782 977 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 MTHFD1P11586 935 aaKnown RBP11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 DPP6P42658 865 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 CD151P48509 253 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 HARS2P49590 506 aaKnown RBP11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 ENTPD1P49961 510 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 RAB10P61026 200 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 NAA20P61599 178 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 SLC27A1Q6PCB7 646 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 PGAM4Q8N0Y7 254 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 CLEC4FQ8N1N0 589 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 FAM110BQ8TC76 370 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 C1orf50Q9BV19 199 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 POLR1BQ9H9Y6 1135 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 SEMA4BQ9NPR2 832 aaPredicted RBP11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 FBXO5Q9UKT4 447 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 KIAA1217Q5T5P2 1943 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 LOXHD1Q8IVV2 1947 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 GMNNO75496 209 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 B3GAT3O94766 335 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 PRKCGP05129 697 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 CDK4P11802 303 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 PAMP19021 973 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 CBX3Q13185 183 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 SLC44A4Q53GD3 710 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 PGM2L1Q6PCE3 622 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 SETD3Q86TU7 594 aaPredicted RBP11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 TTC39CQ8N584 583 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 DDI1Q8WTU0 396 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 ZNF560Q96MR9 790 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 SPON2Q9BUD6 331 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 MRPS26Q9BYN8 205 aaKnown RBP11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 CCDC68Q9H2F9 335 aa11.13□□□□□ -0.63
NECTIN4-201ENST00000368012 DNAJB4Q9UDY4 337 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms