RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 CENPAP49450 140 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 ADORA2A-AS1P86434 159 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 BNC1Q01954 994 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 EFHC1Q5JVL4 640 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 FBXO47Q5MNV8 452 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 C9orf57Q5W0N0 161 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 PRSS57Q6UWY2 283 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 IL20RBQ6UXL0 311 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 H1FNTQ75WM6 255 aaPredicted RBP4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 C16orf82Q7Z2V1 217 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 MON1AQ86VX9 555 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 DENND6AQ8IWF6 608 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 USP38Q8NB14 1042 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 ZMIZ2Q8NF64 920 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 GDPD5Q8WTR4 605 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 RAB40AQ8WXH6 277 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 CNOT9Q92600 299 aaKnown RBP4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 STAMQ92783 540 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 TRIM63Q969Q1 353 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 YME1L1Q96TA2 773 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 CLSTN3Q9BQT9 956 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 PYM1Q9BRP8 204 aaKnown RBP4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 LMAN2LQ9H0V9 348 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 MROH8Q9H579 483 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 CLK4Q9HAZ1 481 aaKnown RBP4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 SPATS2LQ9NUQ6 558 aaKnown RBP4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 ZNF112Q9UJU3 913 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 IGLV5-52A0A0A0MRZ9 124 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 DYTNA2CJ06 578 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 IFITM10A6NMD0 228 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 CEP104O60308 925 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 TFPIP10646 304 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 MYF6P23409 242 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 TTKP33981 857 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 LIFRP42702 1097 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 COMPP49747 757 aaPredicted RBP4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 RPL36AP83881 106 aaKnown RBP4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 CYP4A11Q02928 519 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 ST3GAL1Q11201 340 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 SLC12A1Q13621 1099 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 PLEKHO1Q53GL0 409 aaPredicted RBP4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 DCAF6Q58WW2 860 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 PRSS45Q7RTY3 260 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 ARMC9Q7Z3E5 817 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 NR2C2APQ86WQ0 139 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 MB21D2Q8IYB1 491 aaPredicted RBP4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 TCP11L2Q8N4U5 519 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 TMEM170AQ8WVE7 144 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 TWNKQ96RR1 684 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 ISCA1Q9BUE6 129 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 EPHX3Q9H6B9 360 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 PLSCR4Q9NRQ2 329 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 ALKBH4Q9NXW9 302 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 SLC45A1Q9Y2W3 748 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 PCDHGB3Q9Y5G1 929 aa4.25□□□□□ -1.73
RNU6-553P-201ENST00000364047 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 PLSCR5A0PG75 271 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 FAM90A7PA6NKC0 464 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 SH2D7A6NKC9 451 aaPredicted RBP4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 FAM90A22PA8MWA6 464 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 FAM90A12PA8MX19 464 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 FAM90A23PA8MXZ1 464 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 TIMM23O14925 209 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 PER2O15055 1255 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 TSPAN3O60637 253 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 RPL3P39023 403 aaKnown RBP4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 TBL3Q12788 808 aaKnown RBP4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 COASYQ13057 564 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 NAA25Q14CX7 972 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 SLC39A14Q15043 492 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 EDRF1Q3B7T1 1238 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 DLK2Q6UY11 383 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 LURAP1LQ8IV03 231 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 CCDC105Q8IYK2 499 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 CPXM2Q8N436 756 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 CD180Q99467 661 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 SLC32A1Q9H598 525 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 ANKRD10Q9NXR5 420 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 PAM16Q9Y3D7 125 aa4.24□□□□□ -1.73
RNU6-553P-201ENST00000364047 C17orf113A0A1B0GUU1 675 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 ARHGAP10A1A4S6 786 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 TYW5A2RUC4 315 aaKnown RBP4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 DENND3A2RUS2 1198 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 SMTNL1A8MU46 457 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 EBAG9O00559 213 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 PIP5K1CO60331 668 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 ATP2C2O75185 946 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 CH25HO95992 272 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 HALP42357 657 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 TUBA1BP68363 451 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 GRSF1Q12849 480 aaKnown RBP eCLIP4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 EFR3AQ14156 821 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 CES5AQ6NT32 575 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 SPSB3Q6PJ21 355 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 LDHAL6AQ6ZMR3 332 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 SFTPA2Q8IWL1 248 aa4.23□□□□□ -1.73
RNU6-553P-201ENST00000364047 TRIB2Q92519 343 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms