RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 OR12D3Q9UGF7 316 aa10.71□□□□□ -0.7
SMC3-201ENST00000361804 RNF11Q9Y3C5 154 aa10.71□□□□□ -0.7
SMC3-201ENST00000361804 SNX13Q9Y5W8 968 aa10.71□□□□□ -0.7
SMC3-201ENST00000361804 PLXNA3P51805 1871 aa10.71□□□□□ -0.7
SMC3-201ENST00000361804 FAM149AA5PLN7 773 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 ACOT8O14734 319 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 ATP5BP06576 529 aaKnown RBP10.7□□□□□ -0.7
SMC3-201ENST00000361804 ME2P23368 584 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 SLC5A2P31639 672 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 SLC1A2P43004 574 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 PDAP1Q13442 181 aaKnown RBP10.7□□□□□ -0.7
SMC3-201ENST00000361804 ANO4Q32M45 955 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 MARVELD2Q8N4S9 558 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 ZMIZ2Q8NF64 920 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 CEP70Q8NHQ1 597 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 EME1Q96AY2 570 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 DCPSQ96C86 337 aaKnown RBP10.7□□□□□ -0.7
SMC3-201ENST00000361804 SMOQ99835 787 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 GBA3Q9H227 469 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 FAM95CA0A1B0GW59 222 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 PRORSD1PA6NEY8 169 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 SDHDO14521 159 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 CLIC3O95833 236 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 ASLP04424 464 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 PRAMEP78395 509 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 CCL14Q16627 93 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 TBC1D25Q3MII6 688 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 XKR4Q5GH76 650 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 MORN1Q5T089 497 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 TMEM102Q8N9M5 508 aaPredicted RBP10.7□□□□□ -0.7
SMC3-201ENST00000361804 LPPQ93052 612 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 RNF34Q969K3 372 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 GPR22Q99680 433 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 NAT9Q9BTE0 207 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 FICDQ9BVA6 458 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 PLEKHA5Q9HAU0 1116 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 MYO16Q9Y6X6 1858 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 ZNF487B1APH4 448 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 FBP2O00757 339 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 MSI1O43347 362 aaKnown RBP10.7□□□□□ -0.7
SMC3-201ENST00000361804 MPOP05164 745 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 ZNF865P0CJ78 1059 aaPredicted RBP10.7□□□□□ -0.7
SMC3-201ENST00000361804 IREB2P48200 963 aaKnown RBP10.7□□□□□ -0.7
SMC3-201ENST00000361804 MGAT5BQ3V5L5 792 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 AGKQ53H12 422 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 MAP3K21Q5TCX8 1036 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 ZNF470Q6ECI4 717 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 C16orf89Q6UX73 402 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 BHLHA9Q7RTU4 235 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 ARHGAP18Q8N392 663 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 LRRC52Q8N7C0 313 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 ZC3H15Q8WU90 426 aaKnown RBP10.7□□□□□ -0.7
SMC3-201ENST00000361804 ISL2Q96A47 359 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 GPR78Q96P69 363 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 MCMBPQ9BTE3 642 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 TRPV6Q9H1D0 765 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 MROH8Q9H579 483 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 ZNF385DQ9H6B1 395 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 CAAP1Q9H8G2 361 aa10.7□□□□□ -0.7
SMC3-201ENST00000361804 NOL11Q9H8H0 719 aaKnown RBP10.7□□□□□ -0.7
SMC3-201ENST00000361804 MYADML2A6NDP7 307 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 LRRC14BA6NHZ5 514 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 TIPRLO75663 272 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 TAF6P49848 677 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 PPIDQ08752 370 aaKnown RBP10.69□□□□□ -0.7
SMC3-201ENST00000361804 DYNC1I2Q13409 638 aaKnown RBP10.69□□□□□ -0.7
SMC3-201ENST00000361804 GPR142Q7Z601 462 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 TICAM1Q8IUC6 712 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 RP9Q8TA86 221 aaKnown RBP10.69□□□□□ -0.7
SMC3-201ENST00000361804 STYXQ8WUJ0 223 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 NT5C3BQ969T7 300 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 HSFY1Q96LI6 401 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 PRDM16Q9HAZ2 1276 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.69□□□□□ -0.7
SMC3-201ENST00000361804 C6orf203Q9P0P8 240 aaPredicted RBP10.69□□□□□ -0.7
SMC3-201ENST00000361804 PCDHGA7Q9Y5G6 932 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 PRSS51A0A1B0GVH4 220 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 OR51F1A6NGY5 319 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 ZNF839A8K0R7 811 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 TMEM114B3SHH9 223 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 TARM1B6A8C7 271 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 HAS3O00219 553 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 GJB3O75712 270 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 GNAO1P09471 354 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 CHRM3P20309 590 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 RPL5P46777 297 aaKnown RBP10.69□□□□□ -0.7
SMC3-201ENST00000361804 GALK1P51570 392 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 DBN1Q16643 649 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 LRRC23Q53EV4 343 aaPredicted RBP10.69□□□□□ -0.7
SMC3-201ENST00000361804 TRIM67Q6ZTA4 783 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 C3orf58Q8NDZ4 430 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 TRPV1Q8NER1 839 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 SLCO4A1Q96BD0 722 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 DGCR14Q96DF8 476 aaKnown RBP10.69□□□□□ -0.7
SMC3-201ENST00000361804 PCED1BQ96HM7 432 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 BTBD9Q96Q07 612 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 MPHOSPH6Q99547 160 aaKnown RBP10.69□□□□□ -0.7
SMC3-201ENST00000361804 OLFM1Q99784 485 aa10.69□□□□□ -0.7
SMC3-201ENST00000361804 RBM38Q9H0Z9 239 aaKnown RBP10.69□□□□□ -0.7
SMC3-201ENST00000361804 STAP1Q9ULZ2 295 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms