RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 CCNT2O60583 730 aaKnown RBP13.79□□□□□ -0.2
SGMS1-202ENST00000361781 LDLRP01130 860 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 ASLP04424 464 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 ITGB6P18564 788 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 RXRBP28702 533 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 MBTD1Q05BQ5 628 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 MYLK3Q32MK0 819 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 FOXB2Q5VYV0 432 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 SLC27A1Q6PCB7 646 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 NAPRTQ6XQN6 538 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 PIWIL4Q7Z3Z4 852 aaKnown RBP13.79□□□□□ -0.2
SGMS1-202ENST00000361781 CUZD1Q86UP6 607 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 CAMK1DQ8IU85 385 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 SPNS2Q8IVW8 549 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 ZNF555Q8NEP9 628 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 FBXO30Q8TB52 745 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 FAM162AQ96A26 154 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 RHOJQ9H4E5 214 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 FBRSL1Q9HCM7 1045 aaKnown RBP13.79□□□□□ -0.2
SGMS1-202ENST00000361781 TIMM22Q9Y584 194 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 COPG1Q9Y678 874 aaKnown RBP13.79□□□□□ -0.2
SGMS1-202ENST00000361781 DGKBQ9Y6T7 804 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 ADAMTSL3P82987 1691 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 PFDN6O15212 129 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 POMCP01189 267 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 RBP1P09455 135 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 PTPN1P18031 435 aaKnown RBP13.79□□□□□ -0.2
SGMS1-202ENST00000361781 MAGP20916 626 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 YWHAQP27348 245 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 XIAPP98170 497 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 FRG1Q14331 258 aaKnown RBP13.79□□□□□ -0.2
SGMS1-202ENST00000361781 NOMO2Q5JPE7 1267 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 ZDHHC17Q8IUH5 632 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 OCEL1Q9H607 264 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 PNPLA3Q9NST1 481 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 ASB3Q9Y575 518 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 C10orf71Q711Q0 1435 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 CNTNAP1P78357 1384 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 KLRG2A4D1S0 409 aaPredicted RBP13.79□□□□□ -0.2
SGMS1-202ENST00000361781 CAPN14A8MX76 684 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 TBC1D4O60343 1298 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 ZNF189O75820 626 aaPredicted RBP13.79□□□□□ -0.2
SGMS1-202ENST00000361781 NPR3P17342 541 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 MTTPP55157 894 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 POU4F1Q01851 419 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 CEACAM7Q14002 265 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 INSCQ1MX18 579 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 ATP6AP1LQ52LC2 224 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 ERO1BQ86YB8 467 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 FNDC5Q8NAU1 212 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 RPRD1AQ96P16 312 aaPredicted RBP13.79□□□□□ -0.2
SGMS1-202ENST00000361781 FCRL3Q96P31 734 aaPredicted RBP13.79□□□□□ -0.2
SGMS1-202ENST00000361781 OSBPL11Q9BXB4 747 aa13.79□□□□□ -0.2
SGMS1-202ENST00000361781 SOX17Q9H6I2 414 aaPredicted RBP13.79□□□□□ -0.2
SGMS1-202ENST00000361781 TMEM114B3SHH9 223 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 PTPN3P26045 913 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 CHRNB3Q05901 458 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 SLC25A52Q3SY17 297 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 TIGD2Q4W5G0 525 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 METTL21CQ5VZV1 264 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 OLFML1Q6UWY5 402 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 HFE2Q6ZVN8 426 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 KIAA2013Q8IYS2 634 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 TMIGD2Q96BF3 282 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 RUBCNLQ9H714 662 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 DDX28Q9NUL7 540 aaKnown RBP13.78□□□□□ -0.2
SGMS1-202ENST00000361781 RAB26Q9ULW5 256 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 PRG3Q9Y2Y8 225 aaPredicted RBP13.78□□□□□ -0.2
SGMS1-202ENST00000361781 TRAF6Q9Y4K3 522 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 U3KQV3 271 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 J3QRK9 145 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 SCAMP3O14828 347 aaKnown RBP13.78□□□□□ -0.2
SGMS1-202ENST00000361781 MS4A2Q01362 244 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 TRIM25Q14258 630 aaKnown RBP13.78□□□□□ -0.2
SGMS1-202ENST00000361781 ZRANB3Q5FWF4 1079 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 SPATA2LQ8IUW3 424 aaPredicted RBP13.78□□□□□ -0.2
SGMS1-202ENST00000361781 HEXDCQ8WVB3 486 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 FBXL8Q96CD0 374 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 GAD1Q99259 594 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 C1orf21Q9H246 121 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 LATS2Q9NRM7 1088 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 FADS3Q9Y5Q0 445 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 STYXL1Q9Y6J8 313 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 LRP5O75197 1615 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 USP54Q70EL1 1684 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 SF3B1O75533 1304 aaKnown RBP eCLIP13.78□□□□□ -0.24e-6■■■■■ 94.6
SGMS1-202ENST00000361781 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.78□□□□□ -0.2
SGMS1-202ENST00000361781 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.78□□□□□ -0.2
SGMS1-202ENST00000361781 MSI1O43347 362 aaKnown RBP13.78□□□□□ -0.2
SGMS1-202ENST00000361781 RNASEH2AO75792 299 aaKnown RBP13.78□□□□□ -0.2
SGMS1-202ENST00000361781 PABPC4LP0CB38 370 aaKnown RBP13.78□□□□□ -0.2
SGMS1-202ENST00000361781 ENTPD1P49961 510 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 MAP3K10Q02779 954 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 DCAF4L1Q3SXM0 396 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 PCID2Q5JVF3 399 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 GPR158Q5T848 1215 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 HEATR4Q86WZ0 1026 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 RALGPS2Q86X27 583 aaPredicted RBP13.78□□□□□ -0.2
SGMS1-202ENST00000361781 HDAC10Q969S8 669 aa13.78□□□□□ -0.2
SGMS1-202ENST00000361781 FAR2Q96K12 515 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms