RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 KCNK4Q9NYG8 393 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 BTRCQ9Y297 605 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 MTA2O94776 668 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 CYP1A1P04798 512 aaPredicted RBP12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 CNPP09543 421 aaKnown RBP12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 PABPC1P11940 636 aaKnown RBP12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 GTF2E2P29084 291 aaKnown RBP12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 FOLH1Q04609 750 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 PPP3CAQ08209 521 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 C8orf59Q8N0T1 100 aaPredicted RBP12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 ACTRT2Q8TDY3 377 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 TOR4AQ9NXH8 423 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 KLHL28Q9NXS3 571 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 IRF6O14896 467 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 BMP10O95393 424 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 NUDT14O95848 222 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 MYBL2P10244 700 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 ITGAXP20702 1163 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 GPR15P49685 360 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 CYP4F2P78329 520 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 CYP4F3Q08477 520 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 FRG1Q14331 258 aaKnown RBP12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 PCBP1Q15365 356 aaKnown RBP eCLIP12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 USP45Q70EL2 814 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 C18orf25Q96B23 403 aaPredicted RBP12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 MRPL48Q96GC5 212 aaKnown RBP12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 SIK3Q9Y2K2 1263 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 SIGLEC16A6NMB1 481 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 TRDMT1O14717 391 aaKnown RBP12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 VPS4BO75351 444 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 SERPINA4P29622 427 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 CYP2C18P33260 490 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 SPIDRQ14159 915 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 SAMD4BQ5PRF9 694 aaKnown RBP12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 BROXQ5VW32 411 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 CXCL17Q6UXB2 119 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 TPGS1Q6ZTW0 290 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 CAMK1DQ8IU85 385 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 ZDHHC6Q9H6R6 413 aa12.32□□□□□ -0.44
CCDC144A-204ENST00000360524 RCCD1A6NED2 376 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 PAICSP22234 425 aaKnown RBP12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 S100A3P33764 101 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 HPCAL1P37235 193 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 CD86P42081 329 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 MEA1Q16626 185 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 KRT74Q7RTS7 529 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 PLPPR4Q7Z2D5 763 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 SH3RF1Q7Z6J0 888 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 TTC7BQ86TV6 843 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 KIAA0319LQ8IZA0 1049 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 WDR18Q9BV38 432 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 RHBGQ9H310 441 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 KLQ9UEF7 1012 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 CDH9Q9ULB4 789 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 LYVE1Q9Y5Y7 322 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 KPNA3O00505 521 aaPredicted RBP12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 MEIS2O14770 477 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 PEX11AO75192 247 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 ADRB2P07550 413 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 NPR3P17342 541 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 POLD2P49005 469 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 LPIN1Q14693 890 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 SETMARQ53H47 684 aaPredicted RBP12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 SCIMPQ6UWF3 145 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 KYAT3Q6YP21 454 aaKnown RBP12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 PALB2Q86YC2 1186 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 ZNF558Q96NG5 402 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 TIMMDC1Q9NPL8 285 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 OPTCQ9UBM4 332 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 ANAPC2Q9UJX6 822 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 FBXO10Q9UK96 956 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 DPPA5A6NC42 116 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 HOXB8P17481 243 aaPredicted RBP12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 GSTM5P46439 218 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 MARCKSL1P49006 195 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 QPRTQ15274 297 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 CRY1Q16526 586 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 SPDYCQ5MJ68 293 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 PRAMEF19Q5SWL8 479 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 DNAJB14Q8TBM8 379 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 C1QTNF7Q9BXJ2 289 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 OR12D3Q9UGF7 316 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 LIASO43766 372 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 EPN2O95208 641 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 COX4I1P13073 169 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 NFKB1P19838 968 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 CREMQ03060 361 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 AUHQ13825 339 aaKnown RBP12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 GRIK5Q16478 980 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 POM121L1PQ3SYA9 428 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 EGFLAMQ63HQ2 1017 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 KIAA0408Q6ZU52 694 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 STK40Q8N2I9 435 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 PPP1R16AQ96I34 528 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 SLC25A23Q9BV35 468 aa12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 RSPH9Q9H1X1 276 aaPredicted RBP12.31□□□□□ -0.44
CCDC144A-204ENST00000360524 EPB41L1Q9H4G0 881 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms