RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 NFKB1P19838 968 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 CDC25CP30307 473 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 BNIP2Q12982 314 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 SLC15A2Q16348 729 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.76□□□□□ -0.85
CUX1-203ENST00000360264 FAM136AQ96C01 138 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 FAM205CA6NFA0 338 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 CACNB4O00305 520 aaPredicted RBP9.76□□□□□ -0.85
CUX1-203ENST00000360264 H2AFXP16104 143 aaPredicted RBP9.76□□□□□ -0.85
CUX1-203ENST00000360264 ERCC2P18074 760 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 EIF2B2P49770 351 aaKnown RBP9.76□□□□□ -0.85
CUX1-203ENST00000360264 AP1S2P56377 157 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 ERVK-9P63128 1117 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 DMPKQ09013 629 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 NEPROQ6NW34 567 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 BNIPLQ7Z465 357 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 PSTKQ8IV42 348 aaKnown RBP9.76□□□□□ -0.85
CUX1-203ENST00000360264 CYP4X1Q8N118 509 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 FNIP1Q8TF40 1166 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 CDC42EP4Q9H3Q1 356 aaKnown RBP9.76□□□□□ -0.85
CUX1-203ENST00000360264 A0A1W2PQ67 120 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 ABRQ12979 859 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 SMCO1Q147U7 214 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 BROXQ5VW32 411 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 EEF1AKMT1Q8WVE0 214 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 MAF1Q9H063 256 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 ZDHHC6Q9H6R6 413 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 CADP27708 2225 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 SLC28A1O00337 649 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 SIN3BO75182 1162 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 S100A9P06702 114 aaKnown RBP9.76□□□□□ -0.85
CUX1-203ENST00000360264 CD86P42081 329 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 SLC34A1Q06495 639 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 FKBP1CQ5VVH2 108 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 TXNDC11Q6PKC3 985 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 ACMSDQ8TDX5 336 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 ELOVL2Q9NXB9 296 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 MTM1Q13496 603 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 TMC8Q8IU68 726 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 SPAG4Q9NPE6 437 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 TRIM17Q9Y577 477 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 A0A1W2PQ72 361 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 CHN2P52757 468 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 FAAH2Q6GMR7 532 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 ING4Q9UNL4 249 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 ZNF780BQ9Y6R6 833 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 FAM86C2PA6NEL3 165 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 BTN3A3O00478 584 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 IFNGP01579 166 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 ZCCHC18P0CG32 403 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 ALOX12P18054 663 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 AP5B1Q2VPB7 878 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 STX16-NPEPL1H3BU86 382 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 STX16O14662 325 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 PRODHO43272 600 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 NDUFA9Q16795 377 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 CCDC80Q76M96 950 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 PROSER1Q86XN7 944 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 GPR135Q8IZ08 494 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 ELMO1Q92556 727 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 SENP8Q96LD8 212 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 ZNF354BQ96LW1 612 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 CCDC167Q9P0B6 97 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 PRRG4Q9BZD6 226 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 RGSL1A5PLK6 1076 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 ZNF143P52747 638 aaPredicted RBP9.76□□□□□ -0.85
CUX1-203ENST00000360264 AIF1P55008 147 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 PPIDQ08752 370 aaKnown RBP9.76□□□□□ -0.85
CUX1-203ENST00000360264 NYAP1Q6ZVC0 841 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 ACSF2Q96CM8 615 aaPredicted RBP9.76□□□□□ -0.85
CUX1-203ENST00000360264 CELF6Q96J87 481 aaKnown RBP9.76□□□□□ -0.85
CUX1-203ENST00000360264 SMPD4Q9NXE4 827 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 SLC12A4Q9UP95 1085 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 GATBO75879 557 aaKnown RBP9.75□□□□□ -0.85
CUX1-203ENST00000360264 SMNDC1O75940 238 aaKnown RBP eCLIP9.75□□□□□ -0.851e-5■■□□□ 11.9
CUX1-203ENST00000360264 RAB25P57735 213 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 COLEC10Q9Y6Z7 277 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 XKRYO14609 159 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 ATP13A5Q4VNC0 1218 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 SFRP1Q8N474 314 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 PTCD2Q8WV60 388 aaKnown RBP9.75□□□□□ -0.85
CUX1-203ENST00000360264 DNAJB3Q8WWF6 145 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 PNMA5Q96PV4 448 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 ZNF184Q99676 751 aaPredicted RBP9.75□□□□□ -0.85
CUX1-203ENST00000360264 RHBDL2Q9NX52 303 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 HDCP19113 662 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 PORCNQ9H237 461 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 LACTBL1A8MY62 500 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 AKAP3O75969 853 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 ASMTP46597 345 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 ARFIP1P53367 373 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 SLC12A3P55017 1021 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 SPATA20Q8TB22 786 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 ACTL7BQ9Y614 415 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 SIGLEC16A6NMB1 481 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 TCF4P15884 667 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 HECTD3Q5T447 861 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 OAFQ86UD1 273 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 EFCAB3Q8N7B9 438 aa9.75□□□□□ -0.85
CUX1-203ENST00000360264 RTFDC1Q9BY42 306 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms