RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 FAM136AQ96C01 138 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 YIPF2Q9BWQ6 316 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 TKTL2Q9H0I9 626 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 ATP13A1Q9HD20 1204 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 RPS6KB2Q9UBS0 482 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 PCDHA2Q9Y5H9 948 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 ZNF541Q9H0D2 1346 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 TRAV19A0A0A6YYK7 116 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 BTN3A1O00481 513 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 SEPT4O43236 478 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 GJB6O95452 261 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 GSTM1P09488 218 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 DGKAP23743 735 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 PSMB4P28070 264 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 SLC25A3Q00325 362 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 INO80DQ53TQ3 878 aaPredicted RBP12.34□□□□□ -0.43
DNMT1-202ENST00000359526 ABRAXAS1Q6UWZ7 409 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 SLC44A2Q8IWA5 706 aaPredicted RBP12.34□□□□□ -0.43
DNMT1-202ENST00000359526 TRIM48Q8IWZ4 208 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 PHC3Q8NDX5 983 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 MFSD14AQ96MC6 490 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 ROGDIQ9GZN7 287 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 PIF1Q9H611 641 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 ARHGAP28Q9P2N2 729 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 INVSQ9Y283 1065 aa12.34□□□□□ -0.43
DNMT1-202ENST00000359526 LAMB4A4D0S4 1761 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 STAU1O95793 577 aaKnown RBP12.33□□□□□ -0.44
DNMT1-202ENST00000359526 PKNOX1P55347 436 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 ZACNQ401N2 412 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 FGD2Q7Z6J4 655 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 ZSCAN18Q8TBC5 510 aaPredicted RBP12.33□□□□□ -0.44
DNMT1-202ENST00000359526 TNFRSF25Q93038 417 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 DEPDC7Q96QD5 511 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 HSD17B14Q9BPX1 270 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 FAM126AQ9BYI3 521 aaPredicted RBP12.33□□□□□ -0.44
DNMT1-202ENST00000359526 SERHL2Q9H4I8 314 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 RERGLQ9H628 205 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 FANCEQ9HB96 536 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 SERHLQ9NQF3 203 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 PNPLA3Q9NST1 481 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 OPTCQ9UBM4 332 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 SHOX2O60902 331 aaPredicted RBP12.33□□□□□ -0.44
DNMT1-202ENST00000359526 BMP10O95393 424 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 ETS2P15036 469 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 ALOX12P18054 663 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 ANGPT1Q15389 498 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 C4orf32Q8N8J7 132 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 RNFT2Q96EX2 444 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 ZNF112Q9UJU3 913 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 FAM25AB3EWG3 89 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 FAM25CB3EWG5 89 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 FAM25GB3EWG6 89 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 TGDSO95455 350 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 CKMP06732 381 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 TAB1Q15750 504 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 USP39Q53GS9 565 aaKnown RBP12.33□□□□□ -0.44
DNMT1-202ENST00000359526 LIPMQ5VYY2 423 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 FAM183BPQ6ZVS7 135 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 EGFL6Q8IUX8 553 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 KBTBD2Q8IY47 623 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 DPP10Q8N608 796 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 TMEM159Q96B96 161 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 RIBC2Q9H4K1 309 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 REEP1Q9H902 201 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 UBA2Q9UBT2 640 aaPredicted RBP12.33□□□□□ -0.44
DNMT1-202ENST00000359526 PLA2G4CQ9UP65 541 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 IGKV6D-41A0A0C4DH26 115 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 IGSF6O95976 241 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 ADSSP30520 456 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 SKP1P63208 163 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 LYPLAL1Q5VWZ2 237 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 OR52K1Q8NGK4 314 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 SNRNP25Q9BV90 132 aaKnown RBP12.33□□□□□ -0.44
DNMT1-202ENST00000359526 SEMA6AQ9H2E6 1030 aa12.33□□□□□ -0.44
DNMT1-202ENST00000359526 DHX33Q9H6R0 707 aaKnown RBP12.33□□□□□ -0.44
DNMT1-202ENST00000359526 TMEM191CA6NGB0 347 aa12.32□□□□□ -0.44
DNMT1-202ENST00000359526 CASTOR2A6NHX0 329 aa12.32□□□□□ -0.44
DNMT1-202ENST00000359526 EPN2O95208 641 aa12.32□□□□□ -0.44
DNMT1-202ENST00000359526 MMP3P08254 477 aa12.32□□□□□ -0.44
DNMT1-202ENST00000359526 S100A1P23297 94 aa12.32□□□□□ -0.44
DNMT1-202ENST00000359526 NUP62P37198 522 aaPredicted RBP12.32□□□□□ -0.44
DNMT1-202ENST00000359526 GRIA4P48058 902 aa12.32□□□□□ -0.44
DNMT1-202ENST00000359526 PWP1Q13610 501 aa12.32□□□□□ -0.44
DNMT1-202ENST00000359526 PSRC1Q6PGN9 363 aaPredicted RBP12.32□□□□□ -0.44
DNMT1-202ENST00000359526 UNC5AQ6ZN44 842 aa12.32□□□□□ -0.44
DNMT1-202ENST00000359526 UNKQ9C0B0 810 aaKnown RBP12.32□□□□□ -0.44
DNMT1-202ENST00000359526 SH3BP4Q9P0V3 963 aa12.32□□□□□ -0.44
DNMT1-202ENST00000359526 RPS6KA6Q9UK32 745 aa12.32□□□□□ -0.44
DNMT1-202ENST00000359526 DDX3YO15523 660 aaKnown RBP12.32□□□□□ -0.44
DNMT1-202ENST00000359526 ITGA2BP08514 1039 aa12.32□□□□□ -0.44
DNMT1-202ENST00000359526 ACADMP11310 421 aa12.32□□□□□ -0.44
DNMT1-202ENST00000359526 MYL12AP19105 171 aa12.32□□□□□ -0.44
DNMT1-202ENST00000359526 PTPN3P26045 913 aa12.32□□□□□ -0.44
DNMT1-202ENST00000359526 RAB10P61026 200 aa12.32□□□□□ -0.44
DNMT1-202ENST00000359526 INTS11Q5TA45 600 aaKnown RBP12.32□□□□□ -0.44
DNMT1-202ENST00000359526 TYW3Q6IPR3 259 aaKnown RBP12.32□□□□□ -0.44
DNMT1-202ENST00000359526 IL27RAQ6UWB1 636 aa12.32□□□□□ -0.44
DNMT1-202ENST00000359526 LEMD2Q8NC56 503 aa12.32□□□□□ -0.44
DNMT1-202ENST00000359526 RTKNQ9BST9 563 aa12.32□□□□□ -0.44
DNMT1-202ENST00000359526 SCAF8Q9UPN6 1271 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms