RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 IZUMO3Q5VZ72 239 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 B3GNT9Q6UX72 402 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 SIX6OS1Q8N1H7 587 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 BCL7CQ8WUZ0 217 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 NXPE3Q969Y0 559 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 RILPQ96NA2 401 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 TM9SF2Q99805 663 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 SYT11Q9BT88 431 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 MECRQ9BV79 373 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 KCTD10Q9H3F6 313 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 AKIP1Q9NQ31 210 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 PSMC3IPQ9P2W1 217 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 NXF1Q9UBU9 619 aaKnown RBP9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 PRSS51A0A1B0GVH4 220 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 LRRIQ4A6NIV6 560 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 INO80B-WBP1J3KQ70 363 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 SHOXO15266 292 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 TGFB1I1O43294 461 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 SPAG6O75602 509 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 KCNK2O95069 426 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 TIMP1P01033 207 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 NR3C1P04150 777 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 MCF2P10911 925 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 KRT3P12035 628 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 HOXD8P13378 290 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 NCAM1P13591 858 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 CD1EP15812 388 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 RPL17P18621 184 aaKnown RBP9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 MAP4P27816 1152 aaKnown RBP9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 CYP2C18P33260 490 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 HAAOP46952 286 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 MARSP56192 900 aaKnown RBP9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 CAV1Q03135 178 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 BST1Q10588 318 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 IKBKEQ14164 716 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 MESDQ14696 234 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 ZNF846Q147U1 533 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 TBCCQ15814 346 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 DUSP7Q16829 419 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 CLVS2Q5SYC1 327 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 ZNF600Q6ZNG1 722 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 FRMD7Q6ZUT3 714 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 EMID1Q96A84 441 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 MAGED4Q96JG8 741 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 HEXIM2Q96MH2 286 aaKnown RBP9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 FAM118BQ9BPY3 351 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 TMEM246Q9BRR3 403 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 TMEM121Q9BTD3 319 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 VPS37BQ9H9H4 285 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 XPNPEP3Q9NQH7 507 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 LOC100653049A0A140TA62 436 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 OR5K3A6NET4 321 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 KRT34O76011 436 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 GNAO1P09471 354 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 GARTP22102 1010 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 SLC13A2Q13183 592 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 IQSEC1Q6DN90 963 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 METTL2BQ6P1Q9 378 aaKnown RBP9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 FKBP9P1Q75LS8 142 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 USP37Q86T82 979 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 TMEM130Q8N3G9 435 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 FAM109AQ8N4B1 249 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 BTBD6Q96KE9 485 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 SPATA33Q96N06 139 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 POLR1BQ9H9Y6 1135 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 DNAJC28Q9NX36 388 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 TESMINQ9Y4I5 508 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 C12orf71A8MTZ7 269 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 SPATA31C2B4DYI2 1134 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 BANF1O75531 89 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 MFN2O95140 757 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 ACLYP53396 1101 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 ATXN3P54252 364 aaPredicted RBP9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 PRKAA2P54646 552 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 RAD23AP54725 363 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 LAPTM5Q13571 262 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 CDK10Q15131 360 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 MAPK11Q15759 364 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 CCDC142Q17RM4 750 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 FAM214AQ32MH5 1076 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 Q5BKY6 102 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 ARMCX2Q7L311 632 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 ZNF720Q7Z2F6 126 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 HAUS6Q7Z4H7 955 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 FAM126BQ8IXS8 530 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 ZFP90Q8TF47 636 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 TTC9Q92623 222 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 HTRA1Q92743 480 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 TRIM43Q96BQ3 446 aaPredicted RBP9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 ZNF560Q96MR9 790 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 SEMA6AQ9H2E6 1030 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 SERHL2Q9H4I8 314 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 ZNF302Q9NR11 478 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 FARSBQ9NSD9 589 aaKnown RBP9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 RNF19AQ9NV58 838 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 ENPP5Q9UJA9 477 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 EVPLQ92817 2033 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 NLRC5Q86WI3 1866 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 DENND3A2RUS2 1198 aa9.41□□□□□ -0.9
SMARCAL1-202ENST00000358207 TRIM64A6NGJ6 449 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms